Pseudomonas synxantha BG33R, PseBG33_0030 (glyQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas synxantha BG33R chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTTCAGCCTCGGGTGTAATGGCCGGGACGTCGCTGCGATCCTTGAAGTGATTGACCTTGGGTTTGCCGCCGACAAATGACCACAGCAACCCCACCGGGT CTTCCAGCGCCAGCCAGGCCGCCGCGTTGCGCCGTGTAGCATTGAGCTTCAAGCGATTGCGCACGATGCCCGGATCCTGCATCAGCGCCTCGATTTCTTC ATCGCTTAACCGCGCCAGGCGCTGCGCATCAAAGCCGAACAAGACCTTTCGATAATGCTCGCGTTTGCGTAAAACAGTGATCCAGGACAGACCCGCCTGG AACCCTTCGAGCAAAAGCAACTCGAACAAACCCTGCGCATCGCGCAGCGGCGTTCCCCACTCTTGATCGTGATAAGCCATGTACAGCGGATCTTCAGAAC ACCAAAAGCAGCGTGGCATAAGGCTCCAGGGAGTGGTGGCGGGGCCGAATCGGGTATACTCCCGCTCTTTAAATCGCAGCCCAAGTAACAGGTGAATTTC
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| DNA Sequence for Gene |
>PseBG33_0030
|glyQ
GTGAGCCAGCCTACGCCAGCCGTGCGTACCTTCCAAGACTTGATCCTCGCCCTCCAGCAATACTGGGCCGAGCAAGGTTGTGTGGTACTTCAGCCCTACG ATATGGAAGTAGGCGCCGGCACTTTCCACACCGCTACATTCCTGCGGGCCATCGGCCCGGAAACCTGGAACGCCGCTTATGTGCAGCCCAGTCGCCGCCC GACTGACGGCCGCTACGGCGAAAACCCGAACCGTCTGCAGCACTACTACCAGTTCCAGGTGGTATTGAAGCCCAACCCGGACAACTTCCAGGAACTCTAC CTGGGCTCGCTCAAGCATGTGGGCCTGGACCCACTGGTGCACGACATCCGTTTCGTCGAAGACAACTGGGAATCGCCAACCCTGGGCGCCTGGGGCCTGG GCTGGGAAGTCTGGCTCAATGGCATGGAAGTGACGCAGTTCACTTACTTCCAGCAAGCGGGCGGCATCGAATGCTACCCGGTCACCGGCGAGATCACCTA TGGCCTGGAGCGTCTGGCCATGTACCTGCAAGGCGTGGATTCGGTCTACGACCTGGTATGGGCTGATGGCCCATTCGGCAAGGTGACCTACGGCGATGTG TTCCACCAGAACGAAGTGGAGCAGTCCACCTACAACTTCGAACACGCCAACGTCGACAAGCTGTTCGAACTGTTCGACTTCTATGAAAGCGAAGCCAAGC GGCTGATCGAACTCGACCAGCCGCTGCCGTTGCCAAGCTATGAAATGGTGTTGAAGGCGTCCCATACCTTCAACCTGCTGGACGCCCGCCGTGCCATCTC GGTAACTGCGCGCCAGCAATACATCCTGCGTGTGCGCACGCTGGCACGTTCCGTCGCCCAAGCCTATTTGCTGGCTCGCGCCAAGCTGGGCTTCCCGATG GCAACCCCTGACCTGCGTGATGAAGTGTTGGCTAAGCTGGAGGCTGCACAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGCTCAAGATTTCCTGGTTGAACTGGGCACCGAAGAGCTGCCACCCAAGGCACTCAATACCCTGGCCGATGCATTCCTGGCCGGTATCGAAAAAGGCCT GCAGACTGCCGGCTTGAAGTTTGAAGCCAAAAAAGTCTACGCCGCGCCGCGCCGCCTGGCTGTGCTGCTGACCGCGCTGGAAACCCAGCAGCCGGACCGC AACATCAACCTGGACGGCCCACCGCGCCAGGCAGCTTTCGATGCCGACGGCAACCCGACACAAGCCGCCCTTGGCTTTGCCAAGAAATGTGGCGTAGAGC TGAGCGAGATCGACCAGAGCGGTCCGAAACTGCGTTTCAGCCAGGTCATCACCGGCAAGCCGACCGCCAGCCTGCTGCCGACCATCGTTGAAGACTCCCT GAACGACCTGCCTATCCCCAAGCGCATGCGCTGGGGTGCGCGCAAGGAAGAGTTCGTACGTCCGACCCAATGGCTGGTAATGCTGCTCGGTGACCAGGTC
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| Amino Acid Sequence |
>glycyl-tRNA synthetase
MSQPTPAVRTFQDLILALQQYWAEQGCVVLQPYDMEVGAGTFHTATFLRAIGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPNPDNFQELY LGSLKHVGLDPLVHDIRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQAGGIECYPVTGEITYGLERLAMYLQGVDSVYDLVWADGPFGKVTYGDV FHQNEVEQSTYNFEHANVDKLFELFDFYESEAKRLIELDQPLPLPSYEMVLKASHTFNLLDARRAISVTARQQYILRVRTLARSVAQAYLLARAKLGFPM ATPDLRDEVLAKLEAAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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