Pseudomonas umsongensis 20MFCvi1.1, D470_RS0127870

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas umsongensis 20MFCvi1.1 D470DRAFT_scaffold00016.16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCCTTGTCGCAGGCCGTTTGCAGGGCAACGGCGCAGGCCTGTGGATTAACCCCGCCGGCATTGCTGATCACCCGGATCTGTTGTTTCGCGAGCTGCTC GAGGAGGGGGCTGAGGACTTCGATGAAGTCGCTGGCGTAGCCGGTGGCGGGATCTTTCATCCGCGCCCCGGCCATGATCGACATTGTTATTTCGGCCAGA TAATCGAACACCAGATAGTCCAGTCGCCCGCCCTCCACCAGCTGTGCGGCGGCGGTCGAGGTGTCGCCCCAGAATGCACTGGCACAACCGATGCGAATTG TTTTAGGCACAGTCAACTCCATAGCCACCTGCGACAGAAGTGCTTCGAGACTACCAAGCAAGCGCTTGGTTTGTAAACGCCTTGATTATCTTCTTCCCGA GCGCTTGCTTGGTCGCCCCCGCCAGCTTAAATTGCCCGCGCAACCCTGCTGTTTTAACGGGCAGCGGCGCATTTGATTGATCGACTGTAGGAGAGAACGG
DNA Sequence for Gene
>D470_RS0127870
GTGGACGAGCAAAAAGCCCTGAGGGTGATGCGCGAATTGGTCGACAGCGGCCAATTGACCGACCCCGACAGCGCCCGCGGCAAACTGCTGCAAGTGGCCG CTCACCTGTTTCGCAACAAAGGTTATGAACGCACCACCGTGCGTGACCTGGCCAGTGCGGTGGGCATTCAGTCAGGCAGCATTTTTCATCACTTCAAAAG CAAGGACGAGATCCTGCGGGCAGTGATGGAGGAGACCATCCGCTACAACACCGCGTTGATGCGTGCAGCGCTGGCCGAGGCCGGCAGTGTGCGTGAGCGG GTGCTGGCGCTGATTCGCTGCGAATTGCAGTCGATCATGGGCGGCAGTGGCGAGGCCATGGCGGTGCTGGTGTATGAGTGGCGTTCGCTGTCTGAGGAAG GCCAGGCGCAGGTTCTGGCGCTGCGCGATATTTATGAAGCCATCTGGCTGCAGGTGCTGGGAGAAGCCAAGGACGCCGGTTTTATCCGGGGCGACGTGTT CATCACCCGCCGCTTCCTGACGGGCGCGCTCTCCTGGACCACCACCTGGTTTCGCGCCGATGGCAGTATGAACCTCGATCAATTGGCCGATGAAGCGCTG ATTTTGGTGCTTGAAGAACGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGCCGTCTATCTCGGCAAGAAACTGGCTAAGTTGACGAAACCGCCTAGTTTGTATGCATTGGTGAGTATTTTTTTGGGGAGTGTGCTGTTTTGATGTCT TCATCAATTCGAATGGCGTCGCGGCTTTTGCTAGCGGCGATTGCGGTGTGCTGGGTGTTGCCATCTCAGGCCGCGCAACAGGTGCGGGTCGGGGCCGCCC ATTTTCCACCCTATACCGTGCGCCCGGAGTCCGGTGCCGACACCGGTCTGCTGCCGCAACTGGTGGAAGCGTTGAATCAGCTGCAAACCGATTATCAGTT TGTGCTGGTGCCCACCTCGATTCCCCGGCGTTTCAATGACTTCAAGGAAGGCCGGGTCGATATGGCCATTTTCGAGAACCCGGAGTGGGGCTGGAAGGAC ATTCCGCATACCGACGTCGACATGGGCCTGGAAGATGCAGAAATCTTTGTCGCGCAGAAGCAACCCGGTCGCGATGAGAACTACTTCAAGGATCTGGCGA
Amino Acid Sequence
>TetR family transcriptional regulator
MDEQKALRVMRELVDSGQLTDPDSARGKLLQVAAHLFRNKGYERTTVRDLASAVGIQSGSIFHHFKSKDEILRAVMEETIRYNTALMRAALAEAGSVRER VLALIRCELQSIMGGSGEAMAVLVYEWRSLSEEGQAQVLALRDIYEAIWLQVLGEAKDAGFIRGDVFITRRFLTGALSWTTTWFRADGSMNLDQLADEAL ILVLEER
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site