Pseudomonas umsongensis 20MFCvi1.1, D470_RS0127585
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003725 | double-stranded RNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00057
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF55821 | YrdC/RibB | IPR017945 | DHBP synthase RibB-like alpha/beta domain superfamily | 15 | 216 | 8.85E-64 |
| Pfam | PF01300 | Telomere recombination | IPR006070 | Threonylcarbamoyl-AMP synthase-like domain | 35 | 211 | 3.8E-43 |
| NCBIfam | TIGR00057 | JCVI: L-threonylcarbamoyladenylate synthase | IPR006070 | Threonylcarbamoyl-AMP synthase-like domain | 20 | 213 | 1.3E-60 |
| PANTHER | PTHR42828 | DHBP SYNTHASE RIBB-LIKE ALPHA/BETA DOMAIN-CONTAINING PROTEIN | - | - | 14 | 220 | 2.6E-58 |
| Gene3D | G3DSA:3.90.870.10 | DHBP synthase | - | - | 14 | 219 | 4.6E-66 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.