Pseudomonas umsongensis 20MFCvi1.1, D470_RS0126800
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016740 | transferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:cd16913
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.40.440.10 | - | IPR038063 | L,D-transpeptidase catalytic domain-like | 96 | 232 | 1.3E-24 |
| CDD | cd16913 | YkuD_like | IPR005490 | L,D-transpeptidase catalytic domain | 100 | 232 | 4.86672E-33 |
| SUPERFAMILY | SSF141523 | L,D-transpeptidase catalytic domain-like | IPR038063 | L,D-transpeptidase catalytic domain-like | 97 | 232 | 3.53E-29 |
| Pfam | PF03734 | L,D-transpeptidase catalytic domain | IPR005490 | L,D-transpeptidase catalytic domain | 99 | 232 | 3.0E-18 |
| PANTHER | PTHR30582 | L,D-TRANSPEPTIDASE | - | - | 8 | 239 | 2.9E-44 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.