Pseudomonas umsongensis 20MFCvi1.1, D470_RS0125220 (dppD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas umsongensis 20MFCvi1.1
GCF_000377725.1|latest |
| Locus Tag |
D470_RS0125220
|
| Name |
dppD
|
| Replicon | scaffold00012.12 |
| Genomic location | 131000 - 131968 (- strand) |
Cross-References
| RefSeq | WP_007941106.1 |
| GI | 495216328 |
| NCBI Locus Tag | D470_RS0125220 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
peptide ABC transporter ATP-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.71 |
| Kyte-Doolittle Hydrophobicity Value | 0.042 |
| Molecular Weight (kDa) | 35.0 |
| Isoelectric Point (pI) | 6.25 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004092 (509 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: D470_RS0125220
Search term: dppD
Search term: peptide ABC transporter ATP-binding protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value:
3.5e-14
Percent Identity:
28.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value:
3.5e-14
Percent Identity:
28.5
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value:
3.5e-14
Percent Identity:
28.5
|
References
No references are associated with this feature.