Pseudomonas umsongensis 20MFCvi1.1, D470_RS0115060

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas umsongensis 20MFCvi1.1 D470DRAFT_scaffold00006.6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATCCGCGCCATCAGTGCCGCCTGGCTGCCTTGGGCGTCGAGCACTGAATAGAAGCCCTTTTGCTGCCAGGCACGTTTGCCGAAGGCATCATAAAACAAC CGGGTCGGCGCGGCGGCCTTGCTCCGTTCGCCGTCATAGACCGGCGCCTTCGTCGCACCTCGGGACGCCCCTTCGCCACTGCCCAGGTTGAGCTGACAGG CGGAGTCGTAGCAGGCATGGCAGGCCACGCACTTTTCGGTGAAGATCGGTTGAATGTCGCGAACGTAGGAAATGTCCGGACCTTGCGCAGCGGCGCCCCC GCTTAAAAACAGCATCAATAGGCTGGTGACGACGCGATACGACATATCCCTGGTCCTGATCATGAGAAAACGCCGCGATTCTACCGGTCCGACCCGCGCA CCAACATGAACGATATTCATGCAAAACCGGCATATGCTCCAAAAGCACACAGGTTTGTTATTATCCCGGCCCTTCGTCATGGCCTTACCGAGTAGTCCAA
DNA Sequence for Gene
>D470_RS0115060
ATGTCCGATCGCAGCGTTCGCCTTCAAGCTCTCAAGCACGCCCTCAAAGAGCGCATCCTGATTCTCGACGGCGGCATGGGGACAATGATCCAGAGCTACA AGCTCGAGGAACAGGATTACCGTGGCAAACGCTTCGCCGACTGGCCGAGCGATGTCAAAGGTAACAACGACCTGTTGGTGCTGACCCGCCCGGATGTGAT CGGCTCTATTGAAAAAGCCTACCTGGATGCCGGCGCCGACATTCTGGAAACCAACACCTTCAACGCCACCCAGGTGTCCCAGGCCGACTACGGCATGCAA GGCCTGGCGTACGAACTCAACGTAGAAGGCGCACGCCTGGCGCGCAAGGTGGCGGACGCCAAGACCCTGGAAACCCCGGACAAGCCGCGTTTCGTCGCCG GGGTGCTCGGCCCTACAAGTCGTACCTGCTCGCTGTCGCCCGACGTGAACAACCCCGGCTACCGCAACGTGACCTTCGATGAACTGGTGGAGAACTACAC CGAGGCCACCAAAGGCCTGATCGAAGGCGGCGCCGACCTGATCCTGATCGAAACCATTTTCGACACCCTCAACGCCAAAGCGGCGATCTTCGCCGTGCAA GGGGTTTACGAAGAGCTGGGCGTCGAGCTGCCGATCATGATTTCCGGCACCATCACCGATGCCTCTGGCCGCACCCTCTCCGGCCAGACCACCGAAGCGT TCTGGAACTCCGTGGCCCACGCCAAGCCGATTTCCGTCGGCCTGAACTGCGCCCTCGGCGCCCGTGAATTGCGCCCATACCTGGAAGAGCTGTCGAACAA GGCCAGCACCCACGTGTCGGCGCACCCGAACGCCGGCCTGCCGAACGAGTTCGGCGAGTACGACGAACTGCCGGCCCAAACCGCCAAGGTCATCGAAGAG TTCGCCCAAAGTGGCTTCCTCAACATCGTCGGCGGCTGCTGCGGCACCACGCCGGGCCACATCGAAGCCATCGCCAAAGCGGTCGCCGGTTACGCCCCGC GTGAAATTCCGGACATCCCCAAGGCCTGCCGCCTGTCGGGCCTGGAACCGTTCACCATCGATCGCAGTTCGCTGTTCGTCAACGTCGGCGAGCGGACCAA CATCACCGGTTCCGCCAAGTTCGCCCGCCTGATCCGTGAAGACAACTACACCGAGGCCCTGGAAGTCGCCCTGCAGCAGGTCGAAGCCGGCGCCCAGGTG ATCGACATCAACATGGACGAAGGGATGCTCGATTCGAAGAAGGCCATGGTGACCTTCCTCAATCTGATTGCCGGCGAACCGGACATCTCCCGCGTCCCGA TCATGATCGACTCCTCCAAGTGGGAAGTGATCGAAGCCGGCCTCAAGTGCATCCAGGGCAAGGGCATCGTCAACTCCATCAGCATGAAGGAAGGTGTCGA GCAGTTCATTCATCACGCCAAACTGTGCAAACGCTACGGCGCCGCGGTGGTGGTGATGGCCTTCGATGAAGCCGGCCAGGCCGACACCGAAGCGCGCAAG AAAGAAATCTGCAAACGTTCCTACGACATTCTGGTCAACGAAGTCGGCTTCCCGCCGGAAGACATCATCTTCGACCCGAACATCTTCGCCGTGGCCACCG GTATCGAAGAACACAACAACTACGCTGTGGACTTCATCAACGCCTGTGCCTACATCCGCGACGAACTGCCCTACGCCCTGAGCTCCGGCGGTGTGTCCAA CGTGTCGTTCTCGTTCCGTGGCAACAACCCGGTGCGCGAGGCGATTCACTCGGTGTTCCTGCTGTATGCAATCCGCAATGGCCTGACCATGGGTATCGTC AACGCCGGCCAACTGGAGATCTACGACCAGATCCCGGTGGAGTTGCGCGACGCCGTTGAAGACGTGATCCTCAACCGTACTCCGGAAGGCACCGACGCCC TCCTCGCCATCGCCGACAAGTACAAGGGCGACGGCAGCGTCAAGGAAGCCGAGACCGAAGAGTGGCGCAACTGGGACGTCAACAAGCGTCTGGAGCATGC GCTGGTCAAGGGCATCACCACGCACATTGTTGAAGATACTGAAGAATCGCGGTTGTCGTTCGCGCGCCCGATCGAAGTCATCGAAGGCCCGTTGATGGCC GGCATGAACATCGTCGGCGACCTGTTCGGCGCCGGCAAAATGTTCCTGCCGCAAGTGGTGAAGTCCGCCCGCGTGATGAAGCAGGCCGTGGCCCACCTGA TCCCGTTCATCGAACTGGAAAAAGGCGACAAGCCGGAAGCCAAGGGCAAGATCCTCATGGCCACGGTCAAGGGCGACGTGCACGACATCGGCAAGAACAT TGTCGGCGTGGTGCTGGGCTGTAACGGCTACGACATCGTTGACCTCGGCGTGATGGTGCCGGCGGAGAAGATCCTGCAAGTCGCCAAAGACGAGAAGTGC GACATCATCGGTCTGTCCGGCCTGATCACGCCTTCGCTGGACGAAATGGTTCACGTGGCCCGCGAGATGCAGCGTCAGGACTTCTATCTGCCGCTGATGA TCGGTGGCGCGACCACCTCCAAGGCGCACACGGCGGTGAAGATCGAGCCCAAGTACAGCAACGACGCGGTGATCTACGTCACCGACGCCTCCCGCGCCGT GGGCGTGGCGACGCAGTTGCTGTCCAAGGAATTGAAGGCCGGCTTCGTCGAGAAGACCCGCCTGGAATACATCGACGTTCGCGAGCGCACCGCCAACCGC AGCGCCCGCACTGAGCGCCTGAGCTACCCGGCAGCCATCGCCAAGAAACCGCAGTTCGACTGGGCCAATTATGAGCCGGTCAAACCGACGTTCACCGGCG CCAAGGTACTGGACAACATCGACCTGAAGGTTTTGGCCGAATACATCGACTGGACACCGTTCTTCATCTCCTGGGACCTGGCCGGCAAGTTCCCGCGCAT CCTGCAGGATGAAGTGGTCGGTGAAGCCGCCACCGCGCTGTACGCCGATGCCCAGGAAATGCTTGCCAAGTTGATCGACGAGAAGCTGATCAGCGCCCGT GCGGTGTTCGGTTTCTGGCCGGCCAACCAGGTGCGCGACGATGACATCGAAGTCTATGGCGACGACGGCAAGCCATTGGCCAAGCTGCATCACTTGCGCC AGCAGATCATCAAGACCGACGGTAAGCCGAACTTCTCCCTGGCCGACTTCGTCGCGCCGAAGGACAGCGGCGTGACCGACTACGTGGGTGGTTTCATCAC CACCGCCGGGATTGGCGCCGAAGAAGTGGCCAAGGCCTATCAGGAAGCGGGCGACGACTACAACTCGATCATGGTCAAGGCGTTGGCCGACCGTCTGGCC GAGGCGTGCGCCGAGTGGCTGCACCAGCAAGTGCGTAAAGACTACTGGGGCTACGCCAAGGACGAGACGCTGGACAACGAGGCGCTGATCAAAGAGCAAT ACACCGGCATCCGCCCTGCTCCGGGCTACCCGGCGTGCCCGGATCACACCGAGAAAGCCACGCTGTTCAAGCTGCTGGACCCGGAAGCGGAAGAGCTCAA GGCCGGCCGCAGCGGCGTATTCCTCACCGAGCACTACGCGATGTTCCCGGCGGCGGCGGTCAGCGGCTGGTACTTCGCTCACCCACAGGCGCAGTATTTC GCCGTGGGCAAGATCGACAAGGATCAGGTGCAGAGCTACACCTCGCGCAAAGGCCAGGAGTTGAGCGTGACCGAGCGCTGGCTGGCGCCTAACCTGGGTT ACGACAACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCCTTTCCCCTGTGGGAGCGAGCCTTTTGTAGCGAGGGAGCTTGCTCCCGTTGGACTGCGTAGCAGTCCCATTTTTTGGGGCCGCTTCGCGACCCAACG GGAGCAAGCTCCCTCGCCACAACGGCTCCCACAGAGTTCGAGTCTGTTGTCTATGCTTGCCTCATACACATTCGTGACGGGGGATTTATGGACGATCCAG TCGACAACAATAATCACAACAAGCCGCCGACCTTCTGGCAGATGCTGCACAGCGTCATGGCGGCGGCGTTCGGGGTGCAAAGCGGGAAAAACCGGGCCCG GGACTTCACCCATGGCAAGCCCAGTCATTTTGTGATTCTGGGGATTCTGTTCACGGTGGTGTTCGCCCTGACGCTGTTCGGCATCGTCAAACTGGTGTTG CACCTGGCCGGGATCTGAGCCGGCTCAATGCATCAAGGTTTGCAGGTTGAACGGGTAGCGGTACGACGTCGGCCGCCCCTTGGCCGAGAGCTTTTGAAAA
Amino Acid Sequence
>B12-dependent methionine synthase
MSDRSVRLQALKHALKERILILDGGMGTMIQSYKLEEQDYRGKRFADWPSDVKGNNDLLVLTRPDVIGSIEKAYLDAGADILETNTFNATQVSQADYGMQ GLAYELNVEGARLARKVADAKTLETPDKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADLILIETIFDTLNAKAAIFAVQ GVYEELGVELPIMISGTITDASGRTLSGQTTEAFWNSVAHAKPISVGLNCALGARELRPYLEELSNKASTHVSAHPNAGLPNEFGEYDELPAQTAKVIEE FAQSGFLNIVGGCCGTTPGHIEAIAKAVAGYAPREIPDIPKACRLSGLEPFTIDRSSLFVNVGERTNITGSAKFARLIREDNYTEALEVALQQVEAGAQV IDINMDEGMLDSKKAMVTFLNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHAKLCKRYGAAVVVMAFDEAGQADTEARK KEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFINACAYIRDELPYALSSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRNGLTMGIV NAGQLEIYDQIPVELRDAVEDVILNRTPEGTDALLAIADKYKGDGSVKEAETEEWRNWDVNKRLEHALVKGITTHIVEDTEESRLSFARPIEVIEGPLMA GMNIVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPAEKILQVAKDEKC DIIGLSGLITPSLDEMVHVAREMQRQDFYLPLMIGGATTSKAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKAGFVEKTRLEYIDVRERTANR SARTERLSYPAAIAKKPQFDWANYEPVKPTFTGAKVLDNIDLKVLAEYIDWTPFFISWDLAGKFPRILQDEVVGEAATALYADAQEMLAKLIDEKLISAR AVFGFWPANQVRDDDIEVYGDDGKPLAKLHHLRQQIIKTDGKPNFSLADFVAPKDSGVTDYVGGFITTAGIGAEEVAKAYQEAGDDYNSIMVKALADRLA EACAEWLHQQVRKDYWGYAKDETLDNEALIKEQYTGIRPAPGYPACPDHTEKATLFKLLDPEAEELKAGRSGVFLTEHYAMFPAAAVSGWYFAHPQAQYF AVGKIDKDQVQSYTSRKGQELSVTERWLAPNLGYDN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site