Pseudomonas umsongensis 20MFCvi1.1, D470_RS0110580

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas umsongensis 20MFCvi1.1 D470DRAFT_scaffold00004.4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGGCGACAATGCCGCCGCGGTCAAGCTGACCCTGGAAGACGGCAGCCAGTACGCTGTGGACGGCAAGCTGGAGTTCTCTGAAGTTTCGGTAGACCAGAC CACTGGTTCCGTGACTCTGCGCGCGGTGTTCCCCAACCCTGATCACACCCTGCTGCCGGGCATGTTCGTTCACGCTCAGTTGCAATCCGGCGTGAACAGC GCGGCGATTCTGGCGCCGCAACAAGGCGTGACCCGCGACCTCAAAGGCACCCCGACCGCGCTGGTCGTGGGTCCGGACAACAAGGTCGAACTGCGTCAGC TCAAGGCCAGCCGTACTGTCGGCAACCAATGGTTGATTGAAGACGGCCTGAAGGCAGGCGATCGCCTGATCACTGAAGGGCTGCAATTCGTCAGACCTGG TGTTGAAGTCAAGGCCACTGAAGCCACCAACGTCAACGCCAAGAGCCCGGTCCCCGCACAGGCAGCCAAAGTCGCTGTCGGCGGCAAAGGGGAGTAAACC
DNA Sequence for Gene
>D470_RS0110580
ATGTCGAAATTTTTTATCGACCGTCCGATTTTCGCCTGGGTAATTGCCCTGGTGATCATGCTGGTCGGGGCTTTATCGATCCTCAAGCTGCCGATCAACC AATACCCGAGCATTGCGCCTCCGGCCATTGCGATCTCCGTGACTTACCCGGGCGCGTCTGCACAAACCGTGCAAGACACCGTGGTGCAGGTGATCGAGCA ACAGCTCAACGGTATCGACAACCTGCGTTATGTCTCGTCGGAAAGTAACTCCGACGGCAGCATGACCATTACCGCGACCTTCGAGCAGGGCACCAGCTCC GATACCGCGCAGGTTCAGGTCCAGAACAAACTGAACCTGGCCACCCCGCTGCTGCCACAAGAAGTGCAGCAGCAGGGTATCCGCGTGACCAAGTCGGTGA AAAACTTCCTGATGGTCATCGGTGTGGTGTCGCGCGACGGCAGCATGACCAAGGACGACCTGTCCAACTACATCGTGTCGAACATGCAGGACCCGATCTC GCGGACCGCCGGTGTCGGTGACTTCCAGGTCTTCGGCGCCCAGTACGCGATGCGGATCTGGCTCGACCCGGCCAAGTTGAACAACTTCAACCTGACCCCG GTGGACGTGAAAACCGCCATCGCGGCGCAGAACGTCCAGATCTCGTCCGGTCAACTCGGCGGCTTGCCCGCCCTGCCCGGCCAGCAACTGAACGCTACGA TCATCGGCAAGACCCGCCTGCAGACTGCCGAGCAGTTCAAGGAAATCCTGCTCAAGGTCAACAAGGACGGCTCGCAGGTTCGCCTCAAAGACGTCGCCGA AGTAGGCCTGGGGGGCGAGAACTACAGCGTCAGCGCACAGTTCAACGGCAGCCCGGCCTCTGGTCTGGCAGTGAAACTGGCCAACGGTGCCAACGCCCTC GATACCGCCAAGGCCCTGCGCAAAACCATCGATGACCTGAAGCCGTTCTTCCCGCAAGGGATGGAAGTGGTGTTCCCGTATGACACCACTCCGGTGGTGA CCGAGTCGATCAAGGGTGTGGTTGAAACCCTGGTCGAAGCGATCGTGCTGGTGTTCCTGGTGATGTTCCTGTTCCTGCAAAACTTCCGCGCCACCGTCAT CACCACGATGACCGTGCCGGTGGTATTGCTGGGTACATTCGGGATCCTCGCGGCATTCGGCTTCAGCATCAACACCCTGACCATGTTCGGCATGGTGCTG GCCATCGGCTTGTTGGTGGACGATGCCATCGTCGTGGTGGAAAACGTCGAACGGGTCATGAGCGAAGAAGGCCTGTCACCCAAGGAGGCCACCAAGAAAT CCATGGGGCAGATCCAGGGTGCGCTGGTCGGTATTGCTCTGGTGCTGTCCGCGGTACTGCTGCCGATGGCGTTCTTCAGTGGCTCCACCGGTGTGATCTA CAAGCAGTTCTCGATCACCATCGTTTCGGCCATGGCCTTGTCGGTGCTGGTTGCATTGATCTTCACCCCGGCGCTTTGCGCCACCATGCTCAAGGCGATT CCGAAAGGCGAGCACGGCACGCCGAAACGCGGCTTCTTCGGCTGGTTCAACCGCAACTTCGACCGTGGCGTCAAAAGCTACGAGCGCGGCGTCGGCAACA TGCTCGCGTACAAGGCTCCGTACCTGCTGGCGTACCTGATTATCGTGGTCGGCATGATCTGGCTGTTCACCCGCATTCCAACGGCGTTCCTGCCGGAAGA AGACCAGGGCGTACTGTTTGCCCAGGTGCAAACCCCGGCCGGTTCCAGCTCCCAGCGCACGCAAGTGGTCGTGGATGAAATGCGCGAGTTCCTGCTGCGT CCGAGCAAGGATGGCGGCGAAGGCGATGCAGTGGCCTCGGTGTTTACAGTGACCGGCTTCAACTTCGCCGGCCGTGGCCAGAGTTCGGGCATGGCGTTCA TCATGCTCAAACCATGGGACGAACGTAACGCCGACAACAGCGTGTTCAAACTGGCGGCCCGTGCCCAACAGCACTTCTTTACCTTCCGCGACGCCATGGT GTTTGCCTTTGCGCCACCAGCGGTACTGGAACTGGGTAACGCCACCGGTTTCGACGTATTCCTTCAGGACCGTGCCGGCATCGGTCACAACAAGCTGATG GAAGCCCGTAACCAGTTCCTCGGCATGGCGGCGCAAAGCAAGGTCCTGTCGCAAGTCCGTCCGAACGGCCTGAATGACGAGCCGCAGTACCAGCTGGAAA TCGACGATGAGAAGGCCAGCGCCCTGGGCGTGACCCTCACCGACATCAACAACACCCTGTCGATTGCCCTGGGCAGTAGCTATGTGAACGACTTCATCGA CCGCGGTCGTGTGAAGAAGGTTTACGTGCAAGGCCTGCCCGGCGCTCGCATGAGTCCTGAAGACCTGAAGAAGTGGTACGTGCGCAACAGCGCCGGCACC ATGGTTCCGTTCTCGGCGTTCGCCAGGGGTGAATGGATCTACGGTTCACCGAAACTGGCCCGTTACAACGGCGTGGAAGCGATAGAAATCCTCGGTGCCC CGGCGCCCGGCTATTCCACCGGTGAGGCCATGGCCGAAGTCGAAGCCCTGGCCAAGAAACTGCCGGCCGGTGTCGGTATTTCCTGGACCGGTCTGTCGTA CGAGGAACGTCTGTCCGGCTCGCAAGCACCAGCGCTGTACGCCTTGTCGCTGTTGATGGTGTTCCTGTGTCTGGCGGCGTTGTATGAAAGCTGGTCGATC CCGATCGCGGTCATGCTGGTCGTGCCGCTGGGGATCATCGGTGCGCTGATGGCGACCAGCCTGCGCGGCCTGTCCAACGACGTGTACTTCCAGGTGGGGC TGTTGACCACCATCGGTCTGGCGGCGAAAAACGCCATTCTGATCGTCGAGTTCGCCAAGGAACTGCATGAGCAAGGGCGTAGCCTGCGCGATGCAGCGAT CGAAGCCTGCCGGATGCGTCTGCGACCGATCATCATGACCTCGCTCGCATTCGTGCTCGGCGTGGTACCGCTGGCCATTTCCACGGGCGCAGGTTCGGGT AGCCAACATGCGATCGGTACCGGGGTGATTGGCGGTATGCTCACGGCCACAATCCTGGCGATCTTCTGGGTTCCGTTGTTCTTCGTCACCGTGTCGTCCA TGGGCCAGCGCAAAGTCGCCGACCAGGATGACGCCATTGAAACTCCTCAAGAGGCTGGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAGCAAGTCGCTACTCTCCCTGGCAGTCACCGCTTTCGTGCTGAGTGGCTGCTCGCTGATACCCGATTATCAGCGGCCTGAAGCACCGGTGGCAGGCCA ATACCCGCAAGGCCCGGCGTATTCGCCGGCCCAGGCGCCCAACCAGGCCGCCGCCGAACAGGGCTGGAAGCAGTTTTTCCACGACCCTGCGCTGCAGCAG GTGATTCAGACCGCGCTGGAGAACAACCGTGACCTGCGTGTCGCGGCGCTGAACATCGACGCTTATGCGGCTCAATACCGCATCCAGCGCGCCGACCTGT TCCCGGCGGTTTCGGCCACCGGCAGCGGCAGTCGTCAGCGGGTTCCGGCACGGGCCTCGCAAACCGGCGAAGCGAACATCAACAGTTCCTACTCGGCCAC CGTCGGCATCAGCGCCTACGAACTCGACCTGTTCGGTCGGGTGCGCAGCCTGAGCGAAGAGGCCCTGCAGAAGTACTTCGCCACTGAAGAAGCACGGCGC
Amino Acid Sequence
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAISVTYPGASAQTVQDTVVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTSS DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKSVKNFLMVIGVVSRDGSMTKDDLSNYIVSNMQDPISRTAGVGDFQVFGAQYAMRIWLDPAKLNNFNLTP VDVKTAIAAQNVQISSGQLGGLPALPGQQLNATIIGKTRLQTAEQFKEILLKVNKDGSQVRLKDVAEVGLGGENYSVSAQFNGSPASGLAVKLANGANAL DTAKALRKTIDDLKPFFPQGMEVVFPYDTTPVVTESIKGVVETLVEAIVLVFLVMFLFLQNFRATVITTMTVPVVLLGTFGILAAFGFSINTLTMFGMVL AIGLLVDDAIVVVENVERVMSEEGLSPKEATKKSMGQIQGALVGIALVLSAVLLPMAFFSGSTGVIYKQFSITIVSAMALSVLVALIFTPALCATMLKAI PKGEHGTPKRGFFGWFNRNFDRGVKSYERGVGNMLAYKAPYLLAYLIIVVGMIWLFTRIPTAFLPEEDQGVLFAQVQTPAGSSSQRTQVVVDEMREFLLR PSKDGGEGDAVASVFTVTGFNFAGRGQSSGMAFIMLKPWDERNADNSVFKLAARAQQHFFTFRDAMVFAFAPPAVLELGNATGFDVFLQDRAGIGHNKLM EARNQFLGMAAQSKVLSQVRPNGLNDEPQYQLEIDDEKASALGVTLTDINNTLSIALGSSYVNDFIDRGRVKKVYVQGLPGARMSPEDLKKWYVRNSAGT MVPFSAFARGEWIYGSPKLARYNGVEAIEILGAPAPGYSTGEAMAEVEALAKKLPAGVGISWTGLSYEERLSGSQAPALYALSLLMVFLCLAALYESWSI PIAVMLVVPLGIIGALMATSLRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKELHEQGRSLRDAAIEACRMRLRPIIMTSLAFVLGVVPLAISTGAGSG SQHAIGTGVIGGMLTATILAIFWVPLFFVTVSSMGQRKVADQDDAIETPQEAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site