Strain | Pseudomonas umsongensis 20MFCvi1.1 D470DRAFT_scaffold00003.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCAAGGTGAAGTGGTCAGCGCAGTCAACTTCAACTCGCCGGGCCAGGTAGTGATTGCCGGCGCCAAGGCTGCGGTCGAACGCGCCATCGAAGGCTGCAAG GCGCGTGGTGCCAAGCGCGCCATGCCGTTGCCGGTCAGCGTGCCGTCCCACTGCGAGTTGATGCGTCCGGCCGCCGAGCGATTCGCTGAGTCGATCGCAG CGATCGACTGGCAGGCGCCGCAGATTCCGGTAGTGCAGAACGTCAGTGCCGACGTACCAGCCGATCTGGAAACCCTCAAGCGCGATCTGCTTGAGCAGCT TTACAAGCCTGTGCGCTGGGTCGAATCGGTCCAGGCGCTGGCTGCCAAGGGTGCAACCCAACTGGTCGAGTGCGGTCCGGGCAAGGTCCTGGCCGGTCTG AACAAACGTTGCGCTGAAGGCGTGTCGACCTCTAACCTCAATACCCCAGATGCTTTCGCTGCCGCCCGTGCAGCGCTGGTCTGATCAAGGAGAAGCTTGC
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DNA Sequence for Gene |
>D470_RS0106965
|fabG
ATGAGTCTGCAAGGTAAAGTTGCACTGGTCACCGGTGCCAGCCGTGGTATCGGCCAGGCTATTGCTCTGGAGCTGGGTCGTCAGGGTGCCATCGTTGTTG GCACAGCGACCTCCGCAACGGGTGCCGAGCGTATCGCCGCCACTCTGAAAGAAAACGGTATTCAGGGTACTGGCCTGGAACTCAATGTCACCAGCGACGA GTCCGTAGCGGCCGTGCTGGCGAGCATTCAGGAACAGTTCGGTGCGCCGGCGATCCTGGTCAATAATGCCGGTATCACCCGCGATAACCTGATGATGCGC ATGAAAGATGACGAATGGCATGACGTTGTCGACACCAACTTGAACAGTCTGTTCCGCCTGTCCAAGGGCGTTTTGCGCGGTATGACCAAAGCCCGTTGGG GACGAATTATCAGTATTGGCTCGGTTGTGGGTGCCATGGGCAACGCAGGCCAAGTAAACTACGCAGCCGCCAAGGCCGGTCTGGAAGGTTTCAGCCGTGC GCTGGCGCGTGAAGTCGGTTCGCGTTCGATTACGGTAAACTCGGTGGCCCCAGGGTTCATCGACACCGATATGACCCGCGAACTGCCCGATGCGCAGCGT GAAGCCTTGCAGACGCAAATTCCGCTGGGTCGTCTGGGGCAAGCTCAAGAGATCGCATCTGTGGTCGCTTTTCTTGCGTCCGACGGTGCGGCTTACGTTA CTGGGGCTACAATCCCGGTGAACGGCGGGATGTACATGAGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGTGACGGATTGCTTCAAAAAAATGTCATACGAGCTGTCTAAAATCCGTTATAAAGCTGCAATCTATTTTATCGGCAGAGGGCCGCAGGGTTTGAGGAG TGAAGCTTTCAGTTGAAAAACTGAAAAGTCTTTCTATACACTTACCCACTGGCCAGCTGCCTGAATTTGTCCATTAGGAGTGAAAACAAGGTATGAGCAC CATCGAAGAGCGCGTCAAGAAAATCGTTGCTGAGCAACTGGGCGTTAAAGAAGAAGAAGTGGTCAACACCGCTTCCTTCGTTGAAGACCTGGGTGCCGAC TCCCTTGACACCGTTGAGCTGGTGATGGCTCTGGAAGAGGAATTCGAGACCGAAATCCCTGACGAAGAAGCTGAAAAGATCACTACTGTACAAGCAGCAA TCGACTACGTTACCAGCCATCAGGCGTAATAGTTTTTAGTCGTCGCTCGCTGTCATGGAAAAACCGCACTGCCATCATGGCGTGCGGTTTTTTCTTTAGG
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Amino Acid Sequence |
>3-ketoacyl-ACP reductase
MSLQGKVALVTGASRGIGQAIALELGRQGAIVVGTATSATGAERIAATLKENGIQGTGLELNVTSDESVAAVLASIQEQFGAPAILVNNAGITRDNLMMR MKDDEWHDVVDTNLNSLFRLSKGVLRGMTKARWGRIISIGSVVGAMGNAGQVNYAAAKAGLEGFSRALAREVGSRSITVNSVAPGFIDTDMTRELPDAQR EALQTQIPLGRLGQAQEIASVVAFLASDGAAYVTGATIPVNGGMYMS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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