Pseudomonas umsongensis 20MFCvi1.1, D470_RS0105165 (obgE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas umsongensis 20MFCvi1.1 D470DRAFT_scaffold00002.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTATTCAGGCTTAATCAGCCTAATTCCTCACTAGGAGAATTGAACTCATGGCACACAAAAAAGCTGGTGGTAGTACCCGTAACGGTCGCGACTCAGAAGC CAAACGCCTTGGCGTGAAGATGTATGGCGGCCAGGTCATCAAGGCCGGTAACATCATCGTGCGTCAGCGCGGCACCCAATTCCACGCTGGCTACGGCGTT GGCATGGGTAAAGATCACACCCTCTTCGCGAAAATCGAAGGCGTGATCAAGTTTGAAGTAAAAGGCGCCTTCGGTCGTCGTTACGTGAGCGTCGTCGCAG CTTAATTGCGCGATCGCTGGAAAAGCCCTGTCTTGCGACGGGGCTTTTTCGTTTGTGGGGTGAGTCTCTTGCAAAGCTGTTTGTGATGGGCTCCAGCGCT GTATTGGCGGTCGTTGATTGAGGTCGCTGCGCTCATTTTTGCAAGAGTCTTATGTCTTGGTTGTTTTTCGGCTCGTCCGTATGGCGAGAGGCGTTTTGTT
|
|
| DNA Sequence for Gene |
>D470_RS0105165
|obgE
ATGAAGTTTGTTGATGAAGTATCGATTCGAGTAAAGGCCGGCGACGGTGGTAACGGTTGCATGAGTTTCCGTCGAGAAAAATTCATTGAAAACGGCGGCC CGAACGGCGGCGACGGTGGTGATGGTGGTTCCATCTACATGATGGCCGACGAAAACCTGAACACCCTGGTCGACTACCGTTACACCCGCCACTTCGATGC CGAGCGCGGTTCCAACGGTGGCAGCACCGACTGCACCGGCAAAAAAGGTGAGGATCTGATCCTGCGGGTGCCGGTCGGTACCACAGTGATCGACTCTGCC ACCCAGGAAGTCATCGGCGACCTGACCAAGGCCGGCCAGAAGCTGATGGTGGTTCAGGGAGGCTGGCACGGTCTGGGTAACACTCGTTTCAAATCCAGTA CCAACCGTGCGCCGCGCCAGACTACGCCGGGCAAGCCGGGTGAGCAGCGCGACCTGAAACTGGAAATGAAGGTGTTGGCGGACGTCGGTCTGCTCGGTTT GCCGAACGCCGGCAAAAGTACCTTCATTCGCTCGGTATCGGCTGCCAAGCCGAAAGTCGCCGACTACCCGTTCACCACATTGGTGCCGAACCTGGGTGTG GTCAGTGTCGATCGCTGGAAGAGCTTCGTGGTCGCGGATATTCCGGGCTTGATCGAAGGTGCTTCCGACGGCGCGGGCCTGGGGATTCGCTTCCTCAAGC ACTTGTCGCGTACGCGTCTGCTGCTGCACCTCGTCGACATGGCGCCGCTGGATGACACCAGTGCGCCGGATGCCGCTGAAGTGATCGTCAGCGAGCTGAC CAAGTTCAGCCCGTCCCTGGCCGAGCGTGATCGCTGGCTGGTGCTGAACAAGTGTGACCAGATCCTTGAGGAAGAGCACGATGCTCGCGTCAAGGAGATC GTTGATCGTCTGGAGTGGACCGGTCCGGTCTATGTGATCTCGGCGATCGCCAAGCAAGGCACCGAGCGTCTGTGCCACGACATCATGCGTTATCTGGAAG ATCGCGCCGATCGCCTGGCTAACGACCCGGCCTACAAGGAAGAGCTGGCTGAGCTCGATCAGCGCATCGAAGATGAAGCGCGCGCCCAGTTGCAGGCGCT GGACGATCAGCGTGCTCTGCGCCGCAGCGGCGTGAAGTCGGTCCATGACATCGGTGACGACGATTGGGACGAAGAAGATGTGGATGACGAAGACGGTCCG GAAATCATTTACGTGCGTGACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCGTTGCGATAAACTTAAGCGCCGCTCACTGGAGCGGCGTTTTAGTATCTGGAAATCGACTGTTGGTCACGAAGAACCACGAATAACGTCACGGGCAGT GCCAGGTCGCGCTGCCCTCAAGCTAAGGTTGAAGATGATGCGGAGCAAGGTGACAGGTGCGCAGCGTTGGGTCGTGAAGATCGGCAGCGCTTTGCTGACG GCGGACGGCAAGGGCCTGGATCGCGCAGCAATGGGTGTCTGGGTCGAGCAGATGGTTGCCCTGCATGAGGCGGGCGTTGAGCTGGTGCTGGTGTCCTCCG GGGCAGTGGCGGCGGGCATGAGCCGTCTGGGCTGGACCTCGCGACCCAGTGCGATGCATGAGTTGCAGGCGGCTGCCGCCATCGGTCAGATGGGGCTGGT GCAGGCCTGGGAGTCGAGCTTCGCCGAACATGGTCGGCATACCGCGCAGATTCTCCTGACTCACGACGATTTGTCCGACCGCAAGCGCTACCTGAATGCT
|
|
| Amino Acid Sequence |
>GTPase CgtA
MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIYMMADENLNTLVDYRYTRHFDAERGSNGGSTDCTGKKGEDLILRVPVGTTVIDSA TQEVIGDLTKAGQKLMVVQGGWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKLEMKVLADVGLLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPNLGV VSVDRWKSFVVADIPGLIEGASDGAGLGIRFLKHLSRTRLLLHLVDMAPLDDTSAPDAAEVIVSELTKFSPSLAERDRWLVLNKCDQILEEEHDARVKEI VDRLEWTGPVYVISAIAKQGTERLCHDIMRYLEDRADRLANDPAYKEELAELDQRIEDEARAQLQALDDQRALRRSGVKSVHDIGDDDWDEEDVDDEDGP EIIYVRD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|