Pseudomonas umsongensis 20MFCvi1.1, D470_RS0105075

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas umsongensis 20MFCvi1.1 D470DRAFT_scaffold00002.2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGATGTTCAGGTCCGGCATCGGACGGGCTTCACCGTCGAACTCGGTGTCGACGCCTGCCATGATTTTCAGCAGCGTGGACTTACCCGAACCGTTGAGACC GAGGACGCCGATTTTGGCGCCGGGGAAGAACGACAGCGAAATGTTTTTCAGGATTTCCCGCTTCGGCGGAACAACTTTGCCCAGCCGATGCATGGTGAAG ACGTATTGAGCCATGGAGAACCTAGGGTCAGTGACTGATGAATGATTGGAGCGCAGGCGATGCCCGGCCAGGCCATGCGCGTCGTTCGTTTGATGGGTAT CAAGGCGTGCGCGCTGAAAAAAACCTGAGTCTAGGAGCTGGAACGCTCCCGCGTAACCGGCAAAGCTACCTCATTGACAGAAGGCAGTCCAGCCGAGCGG GGCTGGCACTTCGCCACAACTCAAGGCATGCTAGCCGCCCTTCGGGCGTCCGGCTTATAGTGCACGCCGCGCCAGTCCAGCCAAACCGCAGGATTACAGT
DNA Sequence for Gene
>D470_RS0105075
TTGTCCAATGTCACTCCGCCACCGTCCGCGAGCGTGCTCAACCCTGGGCTCGGCTCGCCCCTGCGCGGAAGCTTGAAGGGCGCGCTGGCGACTCTCGTGC TGTTGCTGCTCGCACTGCTGTTCTGGCAGTTGCTGGATCAACTGCGCGAAACCCAGAAAAACCAGCGCCAGTACACCATCAACTACACCGCCGACCTGGC TTCGCAAGTCAGCCTCAACATGGCGCTCAACGCCCAGATCGCCCTTAATCTGCTACCGATCGTCGAACAACCGCAAAGCGCCGACGAACAGCAGGCATTG CTGCGCAAACTGCAACAGTCGCTGCCCGACCTGCGCAGCCTGGCGCTGCTCAGCCCCTCCGGGAAAGTCCTGAGTGACAGCGCCGTCGACAGCCAGGACG CCAACTACCTGAGCGAACTGGTCCAGCGCAGCCGCGCCCAGGCCCACTATTTCAGCAATGCCGATGACGGCTCGGTGGTGCACCTGCTCCTGCACCAGGC CAGCGGCAGTACTCGCGGCTACTGGGCCCTGCGCCTGACACCGACATTTTTTTCTTCATTGACCAAACAGGGCGACGCCGGCCTTCGCCCCCTGTGGCTG GTGGAAAACCGCATCAATCATCAGATCATCAGTCGCGATGACGCCCTGCCTTCAGCCAAACCCGCGGCGCTGACACCCGACGAACTGACCAACAGCGTAT TGATCGTCCCCCTGAGCAGCAGCGACTGGCAACTGCGCGGGCTGTTCGACCGGCAACGGGTGATCGAACAACTGCTGCCGGCATTCATCGGCAAATGCCT GCTGGGCCTGGCCTTCTCACTGTTACCGTTCATCGCTTTGCTGAACATTCGTCGCCGCCAACGCCAACTGCATGAAGGCCGCCGACGCTATCAGGACATC TTCGAAGGCACCGGTGTTGCCCTGTGCGTGCTGGACCTGTCCGGGCTCAAAAGCTTTTTCGACAAGGCGCAACTCACCAGCAGCGAGCAGCTGAGAACCT GGCTCGGGATACCGGAGCAACGCCAGCAACTGTTGCAGGAACTGCGCATCACCGAGGTCAACCAGGTCGCCCTGCAACTGCTCAACGTCAATTCCTGCGA TCAGGCCTGGAAACTACTGATCAACGGCTGCCCACTGGACTGCACGGCCATCGGCAATCAAGTGCTCGAAGCGGTGCTCCACCAGCAGAAACAGCTTGAG CTGGAAATCAAGCTTCAGGACGCCAATGGCCGCGACCAGCACTTGTGGCTCGTGCTGCGCCTGCCGGAAGATCAGCCCGACCATAGAGCGGTGATCCTGA GCATCAGCGACATCACCAGCCGCAAACTCATTGAGCTTTCGCTGCTGGAGCGCGAAGGATTCTGGTCCGATGTGGTGCGCACCGTGCCGGATCACCTGTA TGTGCAAGACGTGATCAGCCAGCGGATGATCTTCAGCAACCATCACCTGGGGCAGACGCTGGGTTACAACCGCACCGAGCTGCACCAGATGGGCGAGTAC TTCTGGGAAATCCTCTTGCACCCGGAAGATGCCGACTACTACCACCGCTCTCGCCAATCTCAGCGTCAGGCGGGTTACACCCAATTGCTGCAGTGCCAGC TGCGCTTCCGTCATCGCGATGGCAAATGGCGGCGTTTCGATATTCGCGAACAGGCCCTGGCGCGGGACAAGCACGATCAGGTCACGCGCATCATCGGTGT GGCCAAGGACATCACCGAGCAGATCGAAGCCAGTGAATCCCTGCGCGACAGCGAGCAGCGCTACCGGATGCTCGCCGAAAGTATCAGCGACGTGATTTTC TCCACTGACAGCAAGATGGCGCTCAACTACGTCAGCCCTTCGGTGCAAGCGGTGCTGGGCTTCGACGCCGACTGGATATTCCAGAACGGCTGGCAATCGA CCATCGCCAACCCGCAACAACTGAGCGGCATCTACAGTCTGATGGACCGGGTCAGCAAAGCGCTGGATAAACCCGATCAACTGACACTGCTGCGCAGTCA GGTGCAGACCCAACTGTTTTTGTTCGACTGCCTGCGGGCCGACGGACGCAAGATCCCTATCGAGTTGCGTCTAGTTTTGGTCTGGGACGAACACGGCGCC TTCGAAGGTGTGCTCGGGGTCGGTCGCGACATCAGCCAGCAACGCCGGGCCGAGAAGGACCTGCGCATGGCGGCCACGGTATTCGAGCACTCCACTTCGG CGATTCTGATCACTGACCCGGCCGGCTATATCGTCCAGGCCAACGAGGCCTTCAGTCGAGTCAGCGGCTATGCGGTGTCCCAGGTGCTCGATCAGTTGCC GAACATGCTCACCGTCGACGAGCAGCAGGAAACTCATCTGCGCTACGTGCTCAAGCAATTGCATCAGCACAGCACCTGGGAAGGCGAAGTCTGGCTCAAG CGTCGCAACGGCGAGCACTATCCGGCCTGGGTCGGGATTACGGCGGTGCTCGACGACGAAGGCGATCTGGCCAGTTATGTGTGTTTCTTCAGCGACATCA GCGAACGCAAGGCCAGTGAGCAACGGATTCACCGCCTCGCCTATTACGACGCCCTGACCCACCTGCCCAACCGCACGCTGTTCCAGGATCGCCTGCACAC CGCGCTGCAATCGGCGGAACGGCAGAAGTCCTGGGTGGTGCTGATGTTCCTCGACCTGGACCGCTTCAAGCCGATCAACGACTCCCTGGGTCATGCCGCC GGCGACCGCATGCTCAAGGAAATGGCCACGCGCCTGCTCGGCTGCGTCGACGATGACGACACCGTGGCGCGTATGGGCGGTGATGAGTTCACATTGCTGC TGCAACCCCGGGTCAACCGCGAGATCGCGCTGAACCGAGCCATTCACGTGGCCGAACAGATCCTCGCCAGCCTGGTGAAGCCGTTCGTGCTCGAAGGCCG CGAGTTCTTCGTCACCGCCAGTATCGGCATCGCCCTGAGTCCTCAGGACGGTAGCGAACTCAGTCAGCTGATGAAGAACGCCGACACCGCGATGTACCAC GCCAAGGAACGCGGCAAGAACAACTTCCAGTTCTATCAGGCCGACATGAACGCCAGCGCCCTGGAGCGTCTGGAGCTGGAAAGCGACTTGCGCCACGCTC TGGAACAAAACGAATTCGTGCTGTACTACCAGCCGCAATTCAGCGGCGACGGCAAACGCCTGACCGGCGCCGAAGCCCTGCTGCGCTGGCGCCATCCGCG CCGCGGCCTGGTGCCGCCAGGGGACTTCATTCCGGTGCTCGAAGAGCTCGGGCTGGTGGTGGATGTCGGCGACTGGGTGATCGGTGAGGCCTGTCGTCAA CTCAAGACCTGGCACCAGGCCAAGGTGCGGGTGCCGAAGGTCTCGGTGAATATTTCGGCCCGGCAGTTCTCCGACGGGCAGCTCGGCACGCGGATCGCCA CCATCCTCAGGGAAACCGGCCTGCCGCCGGCGTGCCTGGAGCTGGAGCTGACCGAAAGTATCCTGATGCGTGAAGTCAGCGAGGCGATGCAGATCCTCGC CGGACTGAAAAACCTCGGCCTGAGCATTGCGGTCGACGACTTCGGCACCGGTTATTCATCGCTCAACTACCTCAAGCAATTCCCGATCGATGTGCTGAAA ATCGACCGCACCTTCGTTGATGGCCTGCCGTCGGGCGAGCAGGATGCGCAGATTGCCCGGGCGATCATCGCCATGGCCCACAGCCTCAATCTGGCGGTAA TCGCCGAGGGTGTGGAAACCCACGAACAGCTCGACTTCCTGCGCGAGCATGGCTGCGATGAGGTTCAGGGCTACCTGTTCGGCCGCCCGATGCCGGCCGG CCGGTTCGAAGCGCAGTTCAGCAATGATGCGTTGTTCATGTTCGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGAGGAACTTCTGTGGCGCGGGGGCTTGCCCCCCGTTGGGTCGCGAAGCGGCCCCAAAACCCGCGATGACATTTCTTCAGACAAACCGTGTTCGCGCAAA TTACGACTGCTTCGCAGCCGAACGGGGCGATGCGGCGTTCCGACAAGCCCCCTCGCCACAGACGCTACAAATCCTGCGCATGAACACCACTTGTCTGCGA CATGATGTCCTTTCATATGCCATCTAAAAGCGGTTGGGTTAGAATGCCTCCCTTTTCTGCCCCGATCCTTGAGGACCGCCATGTTCAGCCGTGATTTGAC TATTGCCAAGTTCGACGCCGATCTTTTTGCCGCCATGGAGCAAGAAGCTCAGCGCCAGGAAGAACACATTGAGCTGATCGCTTCGGAAAACTACACCAGC CCTGCGGTGATGGAAGCTCAAGGCTCGGTACTGACCAACAAGTACGCCGAAGGCTACCCGGGCAAGCGCTACTACGGTGGTTGCGAGTTCGTCGATATCG
Amino Acid Sequence
>diguanylate phosphodiesterase
MSNVTPPPSASVLNPGLGSPLRGSLKGALATLVLLLLALLFWQLLDQLRETQKNQRQYTINYTADLASQVSLNMALNAQIALNLLPIVEQPQSADEQQAL LRKLQQSLPDLRSLALLSPSGKVLSDSAVDSQDANYLSELVQRSRAQAHYFSNADDGSVVHLLLHQASGSTRGYWALRLTPTFFSSLTKQGDAGLRPLWL VENRINHQIISRDDALPSAKPAALTPDELTNSVLIVPLSSSDWQLRGLFDRQRVIEQLLPAFIGKCLLGLAFSLLPFIALLNIRRRQRQLHEGRRRYQDI FEGTGVALCVLDLSGLKSFFDKAQLTSSEQLRTWLGIPEQRQQLLQELRITEVNQVALQLLNVNSCDQAWKLLINGCPLDCTAIGNQVLEAVLHQQKQLE LEIKLQDANGRDQHLWLVLRLPEDQPDHRAVILSISDITSRKLIELSLLEREGFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGQTLGYNRTELHQMGEY FWEILLHPEDADYYHRSRQSQRQAGYTQLLQCQLRFRHRDGKWRRFDIREQALARDKHDQVTRIIGVAKDITEQIEASESLRDSEQRYRMLAESISDVIF STDSKMALNYVSPSVQAVLGFDADWIFQNGWQSTIANPQQLSGIYSLMDRVSKALDKPDQLTLLRSQVQTQLFLFDCLRADGRKIPIELRLVLVWDEHGA FEGVLGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSQVLDQLPNMLTVDEQQETHLRYVLKQLHQHSTWEGEVWLK RRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQSAERQKSWVVLMFLDLDRFKPINDSLGHAA GDRMLKEMATRLLGCVDDDDTVARMGGDEFTLLLQPRVNREIALNRAIHVAEQILASLVKPFVLEGREFFVTASIGIALSPQDGSELSQLMKNADTAMYH AKERGKNNFQFYQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVIGEACRQ LKTWHQAKVRVPKVSVNISARQFSDGQLGTRIATILRETGLPPACLELELTESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLK IDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRPMPAGRFEAQFSNDALFMFD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site