Pseudomonas umsongensis 20MFCvi1.1, D470_RS0104465

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07943
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07943
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004180 carboxypeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF69189
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR21581 D-ALANYL-D-ALANINE CARBOXYPEPTIDASE - - 33 282 2.1E-44
SUPERFAMILY SSF56601 beta-lactamase/transpeptidase-like IPR012338 Beta-lactamase/transpeptidase-like 9 275 2.67E-89
PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A 62 73 3.1E-16
SUPERFAMILY SSF69189 Penicillin-binding protein associated domain IPR015956 Penicillin-binding protein, C-terminal domain superfamily 275 367 9.42E-26
Gene3D G3DSA:2.60.410.10 - IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily 275 365 1.5E-27
PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A 115 132 3.1E-16
Gene3D G3DSA:3.40.710.10 - IPR012338 Beta-lactamase/transpeptidase-like 24 274 8.9E-98
PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A 142 155 3.1E-16
SMART SM00936 PBP5_C_2 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal 275 365 1.2E-33
Pfam PF07943 Penicillin-binding protein 5, C-terminal domain IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal 275 365 2.1E-24
Pfam PF00768 D-alanyl-D-alanine carboxypeptidase IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal 27 255 1.6E-87

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.