Pseudomonas umsongensis 20MFCvi1.1, D470_RS0104445

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas umsongensis 20MFCvi1.1 D470DRAFT_scaffold00002.2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGACCAGCAATAAGGGAACGCTGTGCGACTGCGACTGATCGCCGTCGGTTCACGCATGCCCAAGTGGGTGGAAGAAGGCTGGCATGAATATGCCAAGCGT CTTCCTTCCGAGCTGGCGCTGGAACTGGTGGAAATTCCGCTCAACACCCGCGGCAAGAACGCTGACGTGGCGCGCTTTATCCGTCAGGAAGGCGAAGCCA TGCTGGCCAAGGTCGGGCCGAACGAGCGCGTTGTCACCCTCGAAGTCCACGGCAAGCCCTGGAGCACCGAGCAACTGGCGGTCGAACTCGATCGCTGGCG GCTGGACTCGCGCACGGTGAATTTCATGGTCGGCGGCCCCGAGGGGCTGGCGCCGGAAGTCTGTGCCCGGGCGGATCAACGTTGGTCGTTGTCGCCGTTG ACGTTGCCGCACCCGCTGGTGCGGATTCTGATCGGCGAACAGCTGTATCGTGCCTGGACAGTGCTGTCCGGCCACCCTTACCACAAGTAGTTCTGCCCTC
DNA Sequence for Gene
>D470_RS0104445
ATGTCCCAGCCGATCCGCATCAAGGACCACGAAAAAGACGCCCGTCTGGTGCGTGGCCGCGTCGTGTTCGGGGCTATTGCGGTAGTGACGCTGATAGGCG TGCTGATCGCGCGGCTGTATTTCCTGCAGGTGATCCAGTACGAGTACCACTCGACCCTGTCGGAAAACAACCGCGTCCATGTGCAGCCGATTCCGCCGAC TCGCGGACTGATCTACGACCGCAATGGCGTGGTGGTGGCCGATAACCGGCCCAGCTTCAGCCTGAGCATGACTCGCGAACGCTCCGGCGACTGGCAGCAA GTGCTCGATGTGATCGTCGAAGTGCTTGAGCTGACGCCCGAGGACCGGGTGATCTTCGAGAAGCGTATGCGTCAGGGGCGTCGGCCGTTCGAGCCGGTGC CGATCCTGTTCGAGCTGACCGAAGAGCAGATCGCCCGCATCGCGGTGAACCAGTTCCGTCTGCCGGGTGTGGAAGTGGTCGCACAGCTGGTTCGTCACTA TCCGCAGGGCGCGCACTTTGCGCACTCAGTGGGATATATGGGGCGGATCAACGAGAAAGAGCTCAAGTCTCTGGACCCGGTGAGTTACAGCGGCACCCAT CAAATTGGCAAAACCGGCATCGAGCGCTTCTACGAGCCCGAATTGCACGGTCAGGTTGGTTACGAAGAAGTCGAGACTAACGCCCGTGGCCGCGTGCTGC GGGTACTCAAGCGTACCGAACCGATTTCCGGCAAGGACATCGTCCTGAGCCTGGACATCAAATTGCAGGAAGCCGCCGAAGCCGCACTTGGCGGTCGCCG TGGCGCGGTCGTGGCGCTGGATCCGGCGACCGGCGAAGTGCTGGCGATGGTCAGCCAGCCGAGTTTCGACCCGAACCTGTTCGTCACCGGCATCAGTTTC AAAGCTTACTCCGAGCTGCGTGACTCCATCGACCGGCCACTGTTCAACCGCGTGCTGCGCGGTCTGTACCCGCCGGGCTCGACCATCAAGCCGGCGGTGG CGATTGCCGGCCTGGATGCGGGCGTGGTCACGGCGTCGACCCGGGTGTTCGACCCGGGCTACTACATGCTGCCCAACTACGATCACAAGTACCGCAACTG GAACCGTACCGGTGACGGCTTTGTCGATCTAGACACGGCGATCATGCGTTCCAACGACACCTACTTCTATGACCTGGCGCACAAGCTGGGGATTGATCGG TTGTCGTCCTACCTGAGCAAATTCGGCATTGGCCAGAAGGTCTCCCTGGACATGTTCGAAGAGTCGCCGGGGCTGATGCCGACACGGGAATGGAAGCGCG TGACCCGTCGTCAGGCCTGGTTCCCGGGCGAGACGCTGATTCTGGGGATCGGGCAGGGCTATATGCAGTCCACTCCGTTGCAACTGGCGCAGGCCACGGC ACTGGTGGCCAACAAGGGTGTCTGGAATCGTCCGCACCTGGCCAAGACCATCGAGGGCGAGAAGCCGAAGGATGAAAATCCGATGCCGGACATTATCCTG CGCGACCCTTCGGACTGGACCAAGGTCAATCACGGCATGCAACAGGTGATGCACGGTGCCCGGGGTACGGCGCGCAAGGCATCGATCGGCGCGCAATACC GGATCGCCGGCAAAAGTGGTACGGCCCAGGTGGTCGCGATCAAACAGGGCGAGAAGTACGACCGCTCCAAGGTGCAGGAGCGCCACCGCGACCACGCCTT GTTCGTCGGCTTCGCGCCGGCCGACAACCCGAAAATCGTGGTGTCGGTGATGGTCGAGAACGGCGAGTCCGGCTCCGGCGTCGCCGCTCCGGTGGTGCGT CAAGTGATGGACGCCTGGCTCCTCGACCAGGACGGCCGACTGAAAGCCGAATACGCCAGCCCTATCAGTGCGGAGGCTACGGCCCGTGAAGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTCGATCGCATGCTCTCCAGCGAGGATGTGATGCGTCGCCGTGCGACGCTGTTGCAACGCCTGCACATCGACGGCCCGCTGCTGATCCTGCTGCTGACC CTCGCCGCCGGCAGCCTGTTCGTGCTGTATTCGGCCAGCGGCAAGAGCTGGGATCTGCTGGCCAAGCAAGCCACTTCCTTCGGCATCGGCCTGGTATCGA TGATCGTCATCGCCCAGTTCGAACCGCGCTTCATGGCCCGCTGGGTGCCGCTCGGCTATGTGGTCGGCGTGATCTTGCTGGTGGTGGTGGACGTCATGGG CCATAACGCCATGGGGGCCACCCGCTGGATCAATATCCCCGGGGTGATCCGCTTCCAGCCCTCGGAATTCATGAAGATCCTGATGCCGGCGACCATCGCC TGGTACCTGGCCAAGCGTTCCTTGCCACCCCAGCTCAAGCACGTGGGGATCAGTCTGGTGCTGATCGGTGTCCCGTTCATTCTGATCGTGCGTCAGCCCG
Amino Acid Sequence
>penicillin-binding protein 2
MSQPIRIKDHEKDARLVRGRVVFGAIAVVTLIGVLIARLYFLQVIQYEYHSTLSENNRVHVQPIPPTRGLIYDRNGVVVADNRPSFSLSMTRERSGDWQQ VLDVIVEVLELTPEDRVIFEKRMRQGRRPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYMGRINEKELKSLDPVSYSGTH QIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTEPISGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPATGEVLAMVSQPSFDPNLFVTGISF KAYSELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDAGVVTASTRVFDPGYYMLPNYDHKYRNWNRTGDGFVDLDTAIMRSNDTYFYDLAHKLGIDR LSSYLSKFGIGQKVSLDMFEESPGLMPTREWKRVTRRQAWFPGETLILGIGQGYMQSTPLQLAQATALVANKGVWNRPHLAKTIEGEKPKDENPMPDIIL RDPSDWTKVNHGMQQVMHGARGTARKASIGAQYRIAGKSGTAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPADNPKIVVSVMVENGESGSGVAAPVVR QVMDAWLLDQDGRLKAEYASPISAEATAREE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site