Pseudomonas mandelii 36MFCvi1.1, F626_RS0123360

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mandelii 36MFCvi1.1 F626DRAFT_scaffold00008.8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATGCTCGGGGAGCTGGCGGTGAATCGAGTGCTGGATAACCTCGATCCGCAGGGCTGACGAAAGTCTGTAGTGAGAGCACTTATTGTGGCGAGGGAGCTT GTCGGATCGCCGCACCGTCCCGCTCGGCTGCGCAGCAGTCGCAAAACCGGCTTATGCGGTGTGCCTGTAAAAAAGCAGTCGCAGGATTTGGGGTCGCTTC GCAACCCAGCGGGAGCAAGCTCCCTCGCCACATGGGTGTGTCAGAGCACGGGGTGATCGCAGGGCGCCGATGTTCCCTAAAGGGGCGCCCCGCACAACCA TTGCTCCCATCTGTAACACCCACCATCGCGGCCCCCGCCCCTCACGGCGTCACTCTGACGCACCGCAACACCTCTACTCCAAGGCCTGCCAACAAATTCA CGCCCCGGCCTGGAAACGGGCACGTTGATTGCTATATTTAATATCGTATACGAAATCCCCAATACGATATCCAACAGCACTTCACATCAACGAGGCCTCT
DNA Sequence for Gene
>F626_RS0123360
ATGAAAAACCCCGCATTTGCCGTAGCCCTCAGCGCTGTTCTCAGTACCTCCTTCATTGCCACCGCCCAGGCCGACAAGCTCGACGACATCATCGGTTCGG GCAAGCTGCGCTGCGCCGTGACCCTGGACTTCCCGCCCATGGGTTTCCGCGATGCTGGTAACAACCCGGCCGGTTTCGACGTGGACTACTGCCGTGACCT GGCGAAAATCCTCGGGGTCGAGGCCGAAGTGGTCGAGACGCCGTTCCCGGACCGTATTCCGGCGCTGGTCTCCGGGCGGGCCGATGTGATCGTCGCCTCC ACTTCCGACACCCTCGAACGGGCCAAGACCGTCGGCCTCACCGTGCCCTACTTCGCCTTCCAGATGGTGGTGCTGACCCGCGACGACACCGGCATCAACA GCTTCGATGACCTCAAGGGCAAACCCGTAGGTAACACCAGCGGCACCTATGAGGCCATCGCGCTAGAGAAAGACGTGAAGAACTGGGGCACCGGCACCTT CCGCGCCTATCAGTCGCAGAACGACACCCTGCTGGCCGTCGCCCAAGGCCATATCGACGCCACCGTGGTCACCAACACCGTGGCCGCCGCCACCCTCAAA TCGGGCAAATACAAAAACCTGAAAGTCGCCGGTAACGCGCCGTACGTGATCGACTACGTCTCCCTCGGCGCCAAGCGCAACGAGTATGGCCTGCTCAACT ACCTCAACCTGTTCGTCAACCAACAGGTGCGCACCGGTCGTTACAAAGAGCTGTTCGTCAAATGGGTCGGCACTGAAATCCCGCCAACCAACCTGACCGT GCCACAGGTCTACTACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTGTCCGGCATGCCTAGGCCCACTTCTCTGACCGGTCGCAGCCTGGTCGCGGGCGCCGCCGAGGGCGCCCTGCTGTTCGCCGATATCGGCTTGAGTTTC TGGGGCGGGGTCGATCCGTTTAGCGGCGAGATCATTGACCGTCACCATCCGCTCAGCGGCGAATACCTGGCCGGCCGCGTGCTGGCCATCCCCAGCGGTC GCGGCTCGTGCACCGGCAGTAGCGTGTTGATGGAACTGATCAGCAACGGTCACGCACCGGCTGCATTGGTGCTGGCCGAACCCGATGAGATCCTGACCTT GGGCGTGCTCGTCGCGCAGACCATTTTCGAGCGTTCCCTGCCGGTGCTGTGCATCGGCCGGGAGGCCTTCGCCGCGTTGCGCGGCAAGGCCTTCGCTCGG GTCGACGGCGCCTCGGTAACCGTGTTCGAACACCTGCCGGGCGATGTCTGGCAGGCACTCGACAGCCCATTGCAAACGCAAGACCCAAGCGCCCCGCTCG
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MKNPAFAVALSAVLSTSFIATAQADKLDDIIGSGKLRCAVTLDFPPMGFRDAGNNPAGFDVDYCRDLAKILGVEAEVVETPFPDRIPALVSGRADVIVAS TSDTLERAKTVGLTVPYFAFQMVVLTRDDTGINSFDDLKGKPVGNTSGTYEAIALEKDVKNWGTGTFRAYQSQNDTLLAVAQGHIDATVVTNTVAAATLK SGKYKNLKVAGNAPYVIDYVSLGAKRNEYGLLNYLNLFVNQQVRTGRYKELFVKWVGTEIPPTNLTVPQVYY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site