Strain | Pseudomonas mandelii 36MFCvi1.1 F626DRAFT_scaffold00005.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGACCGGTAGCGTGATGCTCGAGGGCTGGCTGGCACGGATGTTTTACGTGTCGCTGTACCGCATGCACCAGATGGCGCTGTATGGCGCGTTCCGTACGG CGATGTTGATGCTGGGTAGCAAGATTGGGCGTGGGACCGAGCCACGGCTCAAGTTGCACTAAATTTTCGGCGTCTGTCAGGGCCCATCGCGGGCAAGCCA CGCTCCCACAGGTTATGTGTCGATACCAGATTCCATGGTCGCCCCATAACCTGTGGGAGCGTGGCTTGCCCGCGATGCAGGCGCCTCGGTCTAACCTGTG AACACTTCTGTGTCTCACTGTATCTCCCCCCACGATTTCACCCCTTCGCTTACAAACTCCCTCCTTGCGCGACACAGTAGCGATACACCACGCCCGCTAA ATGGCCACACCCGAGCAAGGCATCGCCTGCTTCGGACATCGCCGCACTTGCGTGGCGTCCTTTATCGAACGGTTGTGTCGTGCAACCCAGGAGATTTGTA
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DNA Sequence for Gene |
>F626_RS0118355
ATGTCCCGTACCACTACTCTCAGCAAAAACACCGTTGGCCTGCTCGGCGCTGTCCTGGCCGGCGGCCTGATGTTGTCCGGTTCCGTATTCGCCGCGCAGC CACTGACCCAGGGCTACATGGTCGCCTCCGCCGAAACTTCGGTAAAAACCCCAGAAGGCAAATGTGGCGAAGGCAAGTGCGGCGATGCCTCGATGGCCAA GACCGACACCGATGGCGATGGTCAGGTGTCCCGTGCGGAGTTCCTGAAAGTGGCGCCCAAGGCAGACTTCGACAAGATCGACACCAACCACGATGGTCAA ATCTCGGAGCAAGAGGCTTTCGATAACGTGAAAGCCAACTACGAAGCCAACGGCAAACAAATGCCAAAAGGCTTGTTCGAGCACCTGAAAGACAACAGCT AA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCTGCGAAGACTTAGCCCTGAAGAGGCAAGCCCTGCTTTTCCACCGATGAGCAGGGCTTTTTTTGTCTGGCGGATTTACCGAAAGCACCGGCCCTGCCC TGCGCTTCGGTTGCACTGGAAGCAATCTGCATTTGTTCGAGGCAAAAAAAAATCCCCGTATCTTTCGATACGAGGATTTTTAATATGGTCGGGGTAAGGG GATTCGAACTCCTGACATCCTGCTCCCAAAGCAGGCGCGCTACCGGACTGCGCTATACCCCGGTAAAAAAAAGGCACCTTTGAAAGGCGCCTTCTGCGAA CAGAGCTTTTGGCGTCTGATCTTAAGATTCGATCCCAGTGTTAACTGGTTTCAAAAATGGTGGGTCGTGTGGGATTCGAACCTACGACCAATTGGTTAAA AGCCAACTGCTCTACCAACTGAGCTAACGACCCAAAAATGGTCGGGGTAAGGGGATTCGAACTCCTGACATCCTGCTCCCAAAGCAGGCGCGCTACCGGA
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Amino Acid Sequence |
>hypothetical protein
MSRTTTLSKNTVGLLGAVLAGGLMLSGSVFAAQPLTQGYMVASAETSVKTPEGKCGEGKCGDASMAKTDTDGDGQVSRAEFLKVAPKADFDKIDTNHDGQ ISEQEAFDNVKANYEANGKQMPKGLFEHLKDNS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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