Pseudomonas mandelii 36MFCvi1.1, F626_RS0113800
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mandelii 36MFCvi1.1 F626DRAFT_scaffold00003.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCCGAACCTGTCGGTGATCCTCGAAACCCTGACCCTGCATGGCAAGCAGCAGATCATGATCCAGGGCTACCTGCCGGCGATCGTTGATGGCGACAAGC GCATCCTGATGATCGACGGCGAGCCTGTGGATTATTGCCTGGCGCGGATTCCGGCAGCAGGCGAAACCCGTGGCAACCTCGCCGCCGGTGGCCGTGGCGA AGCCCGACCGCTGACCGAGAAAGATCGCTGGATCGCCGCGCAAGTCGGCCCGACCCTGCGCGAGAAGGGCTTGCTGTTCGTCGGTCTCGACGTGATCGGT GAGCACCTGACCGAAATCAACGTCACCAGCCCGACCTGCATTCGCGAGATCGATAACGCGTTCGGCACCGACATTGGTGGCCAGTTGATGGATGCCATCG ATCAGAAGCTCAAGGCTCGTTGATCGAGAACAGCCAAGAAACAACCAACATTGCGTTATCATCGCCGGCCTGTAAAAAACGCGATGTTGGTTTTCTTGTC
|
|
| DNA Sequence for Gene |
>F626_RS0113800
ATGACACTCCCGTCCGATCTGCCCGCTGAACTCGCCCATCGTGGCGTGCGCCCGGCCGATCGCCTCGGTTTTACCCTGTTTCTCGCGGCGCTGATTCACC TGGCCTTGCTGTTGGGCGTCGGGTTCACCATGGTCGAACCCAAGCAAATCAGCAAAACCCTGGAAATCACCCTCGCCACCTTCAAAAGCGAAACCAAGCC GAAAAAAGCCGATTTCCTCGCTCAAGAGAATCAGCAAGGCAGCGGCACCCTGGATAAAAAGGCCATTCCCAAGACCACCGAGGTCGCGCCCTTCCAGGAC AACAAGGTGCAGACGGTCACTCCGCCGCCAACCGCTAAACCCCAAGTGCAGGAAGCCGCACCCAAGGCCGCCGTGACGACTGTCGCGCCGAAGCCGAAAA AAGCCGCGACCAAGCAGGAAGACGTCAAGACCGAGACCAAGCCCAAGGTCGAAGCACCGACCTTCGACAGCTCACAGCTGTCCAGCGACATCGCCAGCCT GGAAGCAGAACTGGCCAATGAACAACAGCTGTACGCCAAGCGCCCGCGCATCCACCGCTTGAGCGCCGCGTCGACCATGCGCGACAAGGGTGCCTGGTAC AAGGATGAATGGCGCAAGAAGGTCGAGCGCATCGGCAACCTCAACTACCCCGACGAGGCCCGACGCAAACAGATTTATGGCAACTTGCGCCTGATGGTCT CGATCAACCGCGACGGCTCGCTGTATGAAGTGTTGGTGCTGGAATCGTCCGGCCAACCGCTGCTGGATCAAGCGGCGCAGCGCATCGTGCGGCTGGCCGC GCCGTTCGCACCGTTTACCGGGGATCTGTCGGACATCGACCGCCTGGAAATCATCCGCACCTGGAGGTTTGCGCGCGGGGACCGGTTGTCCAGTAATTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGGAAGATTTGCAGTGATTCAGCCAATACCTTCGCAGGCAAGCCCGGATCAAAAAGACACCTGCACAGGCATTTCCTGTGCATCCTCAGCTTGTCAGTT CGCCCCTCCAACGCCACACTAGCGCTCATGAAGAACGTCAGCCCCAGCTACCTCAAGCATCACTTCCTGATCGCCATGCCTCACATGGCCGACCCGAACT TTGCGCACACCTTGACCTACATCGTCGAGCACACGGCCAATGGTGCCATGGGGCTGGTGGTCAACCGTCCGCAGGACCTGAACCTGGCCGATATCCTCGA GCAATTGCGCCCCGATATCGAACCGCCAGTGCTCTGCCAGCACGTACCGATCTTTATCGGCGGCCCGGTGCAAACCGATCGCGGCTTTGTCCTGCACCCG TCGGGAAAAACCTACCAGGCCACCGTTGATCTGGAAGGCGAGTTGTCGCTGTCGACCTCCCAGGACGTGCTGTTCGCCATCGCCGACGGCGTCGGCCCTG
|
|
| Amino Acid Sequence |
>energy transducer TonB
MTLPSDLPAELAHRGVRPADRLGFTLFLAALIHLALLLGVGFTMVEPKQISKTLEITLATFKSETKPKKADFLAQENQQGSGTLDKKAIPKTTEVAPFQD NKVQTVTPPPTAKPQVQEAAPKAAVTTVAPKPKKAATKQEDVKTETKPKVEAPTFDSSQLSSDIASLEAELANEQQLYAKRPRIHRLSAASTMRDKGAWY KDEWRKKVERIGNLNYPDEARRKQIYGNLRLMVSINRDGSLYEVLVLESSGQPLLDQAAQRIVRLAAPFAPFTGDLSDIDRLEIIRTWRFARGDRLSSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|