Pseudomonas mandelii 36MFCvi1.1, F626_RS0106725 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mandelii 36MFCvi1.1 F626DRAFT_scaffold00002.2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGAGTACATCAACTCGGAAGTGAACCCGGCCATGGCCAACATCGTCGGCCCGAGCGAAGCCATTGTGGTGTCGACGTTCCACATCGAACTCGATGGCGG TGGCGGCGACCTGCACGTGACCATGCCGTACTCGATGATCGAGCCGGTGCGCGAGATGCTCGATGCCGGCTTCCAGTCGGACCTCGACGATCAGGACGAA CGCTGGATCAACGCCTTGCGCCAGGACGTGCTGGACGTCGACGTACCGATCGGTGCCACCGTTGCCCGCCGCCAGCTGCGCCTTCGCGACATCCTGCACA TGCAGCCCGGCGACGTGATCCCGGTCGAGATGCCGGAAGAAATGATCATGCGCGCCAACGGCGTGCCGGCCTTCAAGGTCAAGATGGGCTCGCACAAGGG CAACCTCGCGTTGCAAGTGATCGAGCCGATCGAGCGCCGCTGACCGGCGCTCGTACCTCCCTACGCATTTAACTGAATTGTTGCCCGCCGAGGACAAATG
DNA Sequence for Gene
>F626_RS0106725 |fliN
ATGAACGACGATATGAACGCCCAGGACGACCAGGCACTGGCCGACGAATGGGCTGCGGCCCTGGAAGAAACCGGTGACGCCGGGCAGGCCGACATTGATG CGCTGCTGGCGGCCGATGCCGGTACGTCGGGCTCCAACCGTCTGCCGATGGAAGAGTTCGGCAGCGTGCCGAAGAACCACGATCCAGTGACGCTGGATGG TCCGAACCTGGATGTGATCCTCGATATCCCGGTGTCGATTTCCATGGAAGTCGGCAGCACCGACATCAACATCCGCAACCTGCTGCAACTCAACCAGGGT TCGGTGATCGAGCTCGATCGCCTGGCCGGCGAGCCGCTGGACGTGCTGGTCAACGGCACGCTCATCGCCCACGGCGAAGTGGTCGTGGTCAACGAAAAGT TCGGCATCCGCCTGACCGACGTGATCAGCCCAAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAACAAGGTTCTTGCGGTTCTATTGGCCTTGCCATCCAGCGTGCTGGCGGCCGAGTCGGTGACGACTGCTGCGACAGCGGCGGCCGCGCCAGCCGTCA GCAGCGGTGTGGCCGGGCAGTTGACGCAATTGGTGTTCGGCTTGCTGCTGGTGCTGGGGTTGATCTTCTTCCTCGCCTGGCTGCTGCGCCGGGTCCAGCA GGCCGGGCCGGCCGGCAAGGGGCAAGTGATCGAGTTGATCGGTTCCCGAGCCCTCGGCCCCCGTGACCGTTTGATGCTGGTGCAGGTCGGCAACGAACAG ATTCTGCTCGGCCTGAGCCCCGGCACCATCACCGCGTTGCATGTGCTCAAGGAGCCGGTGCAAGTGCCGAGCGCAACCGAGAAAGCGACTCCGGAGTTTG CCCAGCGTCTGTTGGAGATGCTTGGCAAGGATCAGAAGGATAAGAAGTAATGGGTGCGTTACGCATCGTCTTGACGCTGGCCCTGATGCTGGCTGCGCCA
Amino Acid Sequence
>flagellar motor switch protein FliN
MNDDMNAQDDQALADEWAAALEETGDAGQADIDALLAADAGTSGSNRLPMEEFGSVPKNHDPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQG SVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site