Pseudomonas mandelii 36MFCvi1.1, F626_RS0105360

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR03363 JCVI: type VI secretion system protein TssA IPR017740 Type VI secretion system protein TssA-like 12 363 2.1E-113
Pfam PF06812 ImpA, N-terminal, type VI secretion system IPR010657 ImpA, N-terminal 16 138 1.2E-35
PANTHER PTHR37951 CYTOPLASMIC PROTEIN-RELATED IPR017740 Type VI secretion system protein TssA-like 13 356 2.1E-76
Coils Coil Coil - - 180 200 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.