Pseudomonas caeni DSM 24390, H591_RS0112535
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Coils | Coil | Coil | - | - | 61 | 88 | - |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 425 | 592 | 1.4E-48 |
| Coils | Coil | Coil | - | - | 410 | 430 | - |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 160 | 591 | 5.3E-70 |
| Coils | Coil | Coil | - | - | 308 | 328 | - |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 436 | 590 | 1.88E-44 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 421 | 592 | 1.2E-51 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 421 | 591 | 3.1E-52 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 429 | 591 | 2.9E-45 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 434 | 589 | 3.00322E-56 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 431 | 586 | 9.1E-43 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.