Pseudomonas caeni DSM 24390, H591_RS0112455
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas caeni DSM 24390 H591DRAFT_scaffold00009.9_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAATTGCGGCTTGAAAGCCAACAAAAACGTCACACACAACTCCTCTGCGACCTGCTACGATAGGAACATCTGTGTCAGTTAGTTAAGCCTATAGCTTTAT TTGTTATGGGTTATTTTTTAAACTGTATTTGTTTATGCGCCACTTACGGCGCTGTTTTTTTCTGTGAGGAATACCATGGCTCGCGTTACTGTTGAAGATT GCCTAGAAAACGTTGAAAACCGTTTTGCTTTAGTTATGCTGGCCACCAAGCGTTCGCGTCAATTAGCGACCGGTGGTAAAGAGCCTAAAGTGCCTGTGGA AAATGATAAGCCGACTGTTCTGGCCTTACGGGAAATTGCCGCTGGTCTAGTCTCAGATACAACGATTGCGGCAGAAGAAGCGATCAGTGTTGAAGAACCT TTATTTGCAGCTTTTGACGACAACGCCAACGACGCTCGCTAATGGGTTTGCAGGTCGCTTGCTGCACGAAGAAGGATCAATTGCTATTAGGGGGTGAGCG
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| DNA Sequence for Gene |
>H591_RS0112455
ATGCCTGCTTTAGATCGCCTATCTGGGCAATTATCAACATATCTGAGCAGCGACCAGGTCAATGCGGTGCGCCGTGCGTATTATTACGCCGAGCAAGCCC ACGATGGTCAATTGCGTAGTAGCGGTGAGCATTATGTGACTCACCCGCTGGCGGTAGCCACCATCTTGGCAGACATGCACATGGACCATCAAAGCTTGAT GGCGGCCATGTTGCACGATGTCATTGAAGATACCGGTATTCCCAAAGAAGCTCTCGTCGCACAATTTGGTGACAGCGTTGCCGAATTGGTCGACGGAGTC AGCAAGCTAACGCAAATGAAGTTCGGCACCAAAGCCGAAGCGCAAGCAGAAAACTTCCAAAAAATGGCCATGGCCATGGCTCGCGATATTCGCGTGATTT TGGTGAAGTTGGCCGACCGCTTACACAACATGCGCACCCTCGGCGCGCTGAATGCAGAAAAACGCCGTCGCATTGCCAAAGAAACCCTAGAGATTTATGC ACCCATCGCCAATCGCTTGGGGATGAATCGCATTTATGCTGAGTTCGAAGACCTTGGCTTTAAAGCCATGTACCCGATGCGTGCTGCACGCATCCAGTCT GCGGTTAAAAACTCACGGGGCAATCGCAAAGAAATCGTGCAAAAGATCCAAGAATCCATCGCTCATTGTTTAGAGCGCGAAGGATTACCTGGGGAAGTCA GCGGCCGCGAAAAACACCTGTACAGCATTTATCAAAAGATGCGTGGCAAGCGCAAAGCGTTCGCCGAGATCATGGATGTCTACGCGTTTCGCATCGTCGT CGATAAAGTCGACACCTGCTACCGCGTATTGGGCGCTGTGCATAATCTCTACAAGCCTTTTCCTGGCCGTTTTAAAGACTACATTGCGATTCCCAAAGCC AATGGTTACCAATCCCTGCACACCACTTTGTTTGGTATGCACGGTGTGCCGATTGAGATTCAAATCCGCACCAAAGAAATGGAAGAACTGGCCAATAACG GCATTGCTGCGCATTGGTTGTACAAAACCGAAGAAGATGGCCGTCGCAATAACCACGCGCGCGCGCGTCAATGGGTTAAAGGCTTATTAGAGTTGCAGCA AAACGCCGGTAACTCGCTGGAATTTATTGAAAACGTAAAAATCGATTTATTCCCTGATGAAGTCTATGTGTTCACCCCCAAAGGCCGCATCATGGAGCTA CCAAAAGGCTCAACGCCGGTCGACTTTGCCTATGCCGTGCACACGGATGTGGGCAATACCTGCATTGCTTGCCGAGTGAATCGACGCCTTGCGCCGCTTT CGCAAGCACTGGAAAGTGGCGCCACGGTTGAAATCATTAGCGCGCCCAATACCCAGCCTAATCCCAATTGGCTGAATTTTGTCGTCACCGGTAAAGCACG CACCCATATTCGCCATGCTTTGAAACAACAACGCCGTGAAGAGTCGGTCAGTTTAGGCGCGCGCTTACTGAGCAAGGCTTTGGATAATCTTGGCGTACGC TATGAAGATATTTCTGAAGCGCGTTTACAAGCGCTACTCAAAGAAAACCATCAAGACGAGCGCGATGATTTACTTGAAGAAATTGGTCTAGGTAACCGTA CCGCTCACGTGATTGCCCGACGCTTATTGTCGACCGAAGAATCAGCCGCCAATCCATTGGCCACTGACGGTCCACTGGTGATTCGCGGCACCGAAGGTTT GGTCCTCAACTATGCGCGCTGTTGCACACCAATTCCTGGCGACTTAATTGTCGGCCATTTATCTGCCGGTAAAGGCATGGTGGTGCACCGTGACAGTTGT AAAAATATCAGTGAATTGCGCAACAACCCTGAAAAATGCATCCCGCTGACCTGGGCCAAAGACATTGATAGCGAATTCAATGTTGAACTGCGCATTGAGT TGGCCCATCAGCGTGGGCTAATCGCCCTACTGGCTGGCACCATCAGTGAAGCCGATGCCAACATTGATAAGATCAATGTTGATGAGCGTGACGGCCGCAT TAGCGTCATTCAACTGGGTATTAGCGTGCGTGATCGCGTGCATTTAGCCCGAATTATTCGTAAGTTACGCGGCCTTGCTGGTGTCTCTCGTATTACCCGC ATGCGCGCTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCATTTTATAGCGTACGCCTTTGGGCTGCTGTGGTGGCCTGGCGTGCGGGCTTTCTAAATAACGGAGTACCTTATGAGCAAGACCATTATCAGCACTGA AAACGCCCCTGCCGCGATTGGCACTTACTCACAAGCAGTACGTGTTGAAAACACTGTGTACCTGTCTGGGCAGATTCCGCTGAACCCGACCACCATGGAA ATGGTTGAAGGCTTTGAACAGCAAACCGTACAAGTGTTTGAGAACTTAAAAGCAGTGGCTGAAGCGGCCGGTGGCTCATTAAATGACATCGTTAAGCTGA ATATTTTTTTAACTGACTTGGACAACTTTGCCGCACTCAACGAAGTTATGGGCCGTTACTTTAGCGCGCCTTATCCTGCCCGCGCGGCGGTGGGTGTCGC TTCATTACCACGCAACTCTTGCGTGGAAATGGATGCGGTATTGTATTTAGGTTAAGCCTTGCTGCGCGCTGCAGCGTCTAATCTTGTAGGTTGGCCAGTT
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| Amino Acid Sequence |
>bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
MPALDRLSGQLSTYLSSDQVNAVRRAYYYAEQAHDGQLRSSGEHYVTHPLAVATILADMHMDHQSLMAAMLHDVIEDTGIPKEALVAQFGDSVAELVDGV SKLTQMKFGTKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLGALNAEKRRRIAKETLEIYAPIANRLGMNRIYAEFEDLGFKAMYPMRAARIQS AVKNSRGNRKEIVQKIQESIAHCLEREGLPGEVSGREKHLYSIYQKMRGKRKAFAEIMDVYAFRIVVDKVDTCYRVLGAVHNLYKPFPGRFKDYIAIPKA NGYQSLHTTLFGMHGVPIEIQIRTKEMEELANNGIAAHWLYKTEEDGRRNNHARARQWVKGLLELQQNAGNSLEFIENVKIDLFPDEVYVFTPKGRIMEL PKGSTPVDFAYAVHTDVGNTCIACRVNRRLAPLSQALESGATVEIISAPNTQPNPNWLNFVVTGKARTHIRHALKQQRREESVSLGARLLSKALDNLGVR YEDISEARLQALLKENHQDERDDLLEEIGLGNRTAHVIARRLLSTEESAANPLATDGPLVIRGTEGLVLNYARCCTPIPGDLIVGHLSAGKGMVVHRDSC KNISELRNNPEKCIPLTWAKDIDSEFNVELRIELAHQRGLIALLAGTISEADANIDKINVDERDGRISVIQLGISVRDRVHLARIIRKLRGLAGVSRITR MRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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