Strain | Pseudomonas caeni DSM 24390 H591DRAFT_scaffold00009.9_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCGTCTCTGCTACTTTACTTTTTGCTAGAGCTGACACATAAGTTTTGTACATGTCGTACTTCGGGGCAGGTGTTTATCCGTCGATGAACCCATCCAGGG TTCAACTCCGGCGCTACGCCATCCATGGCTCGCTCATCACACCAACCCCGAAGTACTCGTTGATCATTTTTACTGTTGGCACTATTGCAGTTTAATCAAA GCAAGTAAAAGCAGGCTCCTGCATGTCTGGCTTGTACTTTTGGAGGCGTACTTAAAAAACCGCCAACAACATCATTGATCAATAAGTGCCTTGTTCGTGC TGCGACCAGCGCAGCCATGGATGGCGCAGCGCCCGAATCGGGCCAGGATGATCCGTTGAGGGAAAAGCAGGATGAACAAGGTACGGCATGCGCCTATATA AATTGTTTTTAAACGAGCGCGATCTTAGGCAAGCTACTCCTACTTACCAATGACTGCTCTGCTATGCTCCTAGTTATCCAATATCCGCAGAGGCGTTCTC
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DNA Sequence for Gene |
>H591_RS0112420
ATGGCTCGTTTACAAGATAAAGTTATTATCATCACCGGCGCAGCACAAGGTATGGGCGCAACCCATGCACGTATGTGCATCGAGGCCGGCGCCAAGGTTG TGTTAACCGATATCAACACCGAAAAAGGCCAAGCCCTCGCCGCAGAGTTAGGTAACCAAGCGTTATTTATCCAACACAACGTCACCAGCGAAGACGATTG GACGCAAGTGATTGCCGCCACGCAAGCGTATTTCGGCACAATCAATGTGCTCGTTAATAACGCCGGGATTACTCAATCCAAATCGATCCTAGAAACATCT TTAGATGATTACCGCCGTATTCTTGAGATCAACCAAGTCTCAGTGTTTTTAGGCATGAAGGCGGTCATCCCATCGATGCAAGCCAGTAAGCAAGGTTCAA TTATTAACATTTCATCAATTAACGGTTTGGTCGGTGGTGCGATTGGCTATACCGATTCTAAATTTGCTGTACGTGGGATGACTAAAGCGGCTGCTTTAGA GTGCGCACCTTTTGGTATTCGCGTGAACTCTGTGCACCCAGGTGTGATTGCTACACCCATGATTATGCAAGGCGACACTAAGGCGGCGGTGGAAGCTTTT GCTAAAAGCATTCCGCTGAGACGTGTGGCGCAACCGGAAGAAGTCAGCCGTCTCGTGCTCTACTTAGCGTCGGATGACTCCAGCTACTCGACAGGCTCAG AGTTTATTGTCGATGGCGGTTTAACCGCGCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCAATCATTGGGCGATGACTTGCGGTATCGCCAATTACTCGGCTGCACTCAAGCGACTAGCATGGCAATTCTGACGCGCAGTCTGTTGCAATGCTTAAG CTACAACCAACCTTGACGCCAGTGTTCGGTGTTTTTTAAGTCCTGCCAATCAATCGCTGCTTGACGATTAGAGATCACCGCCTCCAGCAAGCAATGGATA ACATTGCCCTCTTCATCAAACTCCATTTCGGTGACCAAGAAGTGTTTTTCTTTATTGACTGGATGCACCGCCGTCCACTTACTGTGCAGTAGTTTTTTAG GGTTAATTTGATTCACAGCACGCTCCTCACACCATTATTTATAAACTGTCCAATACCCTACAGCAGCCGCAACATAAAACTGCCTTGCAGCAACACCTGC AATCGAGCTTAGGTTTTTGCTAAGCTGGCCGCTGTTAGAACCACTCTCTGCAATCAATGACAGATAAGGTTGATGCCGTGCCAATCATTCTTCCCTCAAC
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Amino Acid Sequence |
>3-alpha-hydroxysteroid dehydrogenase
MARLQDKVIIITGAAQGMGATHARMCIEAGAKVVLTDINTEKGQALAAELGNQALFIQHNVTSEDDWTQVIAATQAYFGTINVLVNNAGITQSKSILETS LDDYRRILEINQVSVFLGMKAVIPSMQASKQGSIINISSINGLVGGAIGYTDSKFAVRGMTKAAALECAPFGIRVNSVHPGVIATPMIMQGDTKAAVEAF AKSIPLRRVAQPEEVSRLVLYLASDDSSYSTGSEFIVDGGLTAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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