Pseudomonas caeni DSM 24390, H591_RS0104940 (fliN)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas caeni DSM 24390 H591DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCCATTTTAGATGTTAATTTTGAATACATGAACTCTGAGGTTAACCCCGCTTTAGCTAACATTGTTAGTCCTAGTGAAGTGGTAGTGATCTCGACCTT TCATATTGAGTTGGATGGCGGTGGTGGTGATTTACATATTACTTTACCGTATTCAATGATTGAGCCTATTCGTGAAATGCTCGATGCGGGCTTTCAATCT GACGTTGATGATCAAGATGAGCGTTGGAGCAAAGCCATTCGTGAAGATATTTTAGATGTTAAAGTTCCGCTCACATCTACCGTTGTGCAGCGTCAATTAA AACTACGCGATATCTTAAATATGCAACCTGGTGACGTCATTCCAGTGGAGCTGCCAGATTCAATGCTAATGCGTGCTAATGGCGTTCCGACCTTCAAAGT TAAACTGGGCGCGCATCATGGTAATTTAGCGTTACAAGTCTTGGGTCCCATTCAAAAAAACCGTTGATTTTTGACCTTATTAAGTAGTTGAGAAAAGAAT
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| DNA Sequence for Gene |
>H591_RS0104940
|fliN
ATGAATGACGAAAACGAACAAACCTCAAGTGAAGATCAAGCGCTTGCTGATGAGTGGGCTGCCGCCTTAGCTGAAGCAGATACGGCGACTGATCAGGATG ATATTGATGCAATGCTCAATCAAAGCAGTGGTCCGGCGAAAGCGCCAATGCAAGATTTTCCTGACCAGCACAGCGAGAATGAAGTTATTACGTCTTTAGG CGGGCCTAATTTAGATGTGATTCTGGATATTCCTGTGAGCATTTCTATGGAAGTGGGTAGCACAGATATCAGTATTCGTAACTTATTGCAGCTTAACCAA GGCTCGGTGGTTGAATTAGATCGCCTGGCCGGTGAGCCTCTCGATGTGTTGGTCAACGGCACACTGATTGCTCATGGTGAAGTGGTGGTGGTCAATGAAA AATTTGGTATTCGTTTGACTGATGTGATCAGTCCAAGCGAGCGCATTAAGAAACTACGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTATGCGTCTTTTAATGATGTTGATGTTAGTTTCTGCTAGTGCTTGGTCGGCAGAGCCAGCAGTGACGCAAAAAAGCGCAACCATTGTTAGTGCTCCG AGCCAATCCAAGCTTTTAGAAGCGGGACAGGTCAGCGGCCAACTGCTGCAACTGGTGCTCGGTTTGTTATTGGTGATTGGGCTGATTTTTTTATTAGCAT GGGTGGTGCGCCGTATACAACAAAACATCCCCGTGTCGGGCTCGCAGCAGGCTATTTCGTTATTGGCCAGCCAAACACTAGGGCCGCGTGATCGCTTGCT GTTAGTGCAAGTTGGTAAAGAGCAAATTTTACTGGGATTAACTCCTGGAACAATTGTGCCTTTGCATGTTTTGCAAGAACCTATTGAGGTCAGCAAACCT GAAGGTCATTTAGGTTCAGCGTTTGCTCAGCGCTTAGCCAAAGCGTTGAAAACTTCAGCAAAGGATGAGCCGGAATGAGTGTACTTGCGCGCTTAATGTT
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| Amino Acid Sequence |
>flagellar motor switch protein FliN
MNDENEQTSSEDQALADEWAAALAEADTATDQDDIDAMLNQSSGPAKAPMQDFPDQHSENEVITSLGGPNLDVILDIPVSISMEVGSTDISIRNLLQLNQ GSVVELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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