Pseudomonas caeni DSM 24390, H591_RS0103495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas caeni DSM 24390 H591DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAAAAGCCAGCGAGAATGCGGCTCAAGTTACTCTGAAGCTACAAGACAACAGCGAATACTCACACAAAGGCACACTAGAGTTCTCCGAAGTGTCCGTGGA CGCCAGCACCGGCTCAGTCACCTTGCGTGCGGTTTTCCCAAACCCTGATGGCTTGCTACTGCCAGGCATGTTTGTTTATGCCAACTTAATCAGCGGCGTG CAAAGCCAAGCTATTCTAGCGCCACAACAAGGCATCACCCGTAACCCCAAAGGTGAGGCAATGGCGATGGTGCTCGACGCTGACAATAAAGTTGAAGTGC GCATGCTAAAAGCGGAACGTACCTCAGGCAATTACTGGTTAGTCAACGAAGGCTTACAAGCAGGTGATCGCTTAATCACTGAGGGACTACAGTTTGTTCG CCCAGGTGCCACTGTCGATCCGTATCCTGCTGGCAATGTTTCTGCAGCAAATACATCTTCTGAAAAAACTGCACCGCAAGCTCAATAAGGGAATCTTTTC
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| DNA Sequence for Gene |
>H591_RS0103495
ATGTCGAATTTCTTCATCGACCGCCCCATCTTTGCTTGGGTACTTGCCCTGGTAATTATGTTGATTGGCGGACTGGCGATTCTTAAATTGCCAGTCAATC AATACCCAAGTATTGCTCCACCTGCAGTAGGCATCTCTGTAAGCTACCCAGGTGCTTCAGCACAAACAGTGCAAGACACCGTGGTTCAGGTGATCGAGCA AAAAATGAATGGTATTGACGGCTTGCGCTATATTTCCTCGGAAAGTAACTCCGACGGCAGCATGAGCATTACCATTACTTTTGAGCAGGATGTCGACCCA GATATCGCGCAAGTTCAGGTGCAGAACAAGCTGCAACTGGCCACTCCGCTACTCCCACAAGAAGTGCAGCAGCAAGGTATTCGCGTCACTAAGTCAGCCA AAAACTTCTTAATGGTTGTCGGGATTATTTCTGAAGACGGCAGCATGAACAGGTATGACCTGGCTGACTACACCGTTTCTAATATCCAAGACCCGATCTC ACGTACCCAAGGTGTCGGTGACTTCCAGATTTTCGGTGCTCAATACGCGATGCGTATTTGGCTGGATCCAATCAAACTGACCAACTTTGCGATGACGCCG ATCGATGTAGCGACGGCAATTCGCGCGCAAAACGTACAAGTGTCTTCTGGTCAACTGGGTGGTCTACCCGCATCGCCAAACCAGCAACTGACCGCCACCA TTATTGGTAAGACCCGTTTCGAAACGCCTGAGCAATTTGAAAACATCTTGCTCAAAGTTAATCAAGATGGCTCACAAGTCCGCCTGAAAGATGTGGCGCG TGTTGAGCTGGGCGGTGAAAACTACAGCATTAACGCTGAATATAACGGTAAAGCGGCAACAGGGATTGGTATCAAGTTGGCTACCGGTGCCAACGCCCTT GATACCGCTCGCGCCGTGCGTGCAACCCTCGCCGAACTCGAGCCTTTCTTTCCGCAAGGAATGAAAATTGTTTATCCATACGACACTACACCGGTGATCT CTGCTTCGATTGAAGGGGTTATTTATACTCTTATCGAAGCCTTTATCCTTGTGTTCTTGGTCATGTATCTGTTTATGCAGAACCTGCGCGTAACCTTAAT TCCCGCTTTGGCTGTGCCAGTGGTTATTCTCGGTACCTTCGGCGTATTGGCTGCGTTTGGTTACAGCATCAACACCCTGACGATGTTCGCTATGGTCTTG GCCATCGGACTGCTGGTGGATGACGCCATTGTTGTCGTGGAAAACGTTGAACGCGTAATGGAAGAAGAAGGTTTGTCACCGCTGGAAGCTACGCGTAAAT CCATGGGACAGATTCAAGGCGCGCTGGTCGGTATTGGTCTGGTGTTGTCGGCGGTATTTATTCCGATGGCCTTCTTTGAAGGCTCAACTGGTGCGATTTA TCAGCAGTTCTCGGTAACTATTGTTTCTGCGATGGTGCTTTCAGTACTGGTAGCATTGATTTTTACTCCCGCATTGTGCGCCACCATGCTTAAGCCGATT AAGAAAGGTGGCAACATCGAAAAGCGCGGTTTCTTCGGTTGGTTTAACCGCAGCTTCCAACGCGGCGTGAACAAGTATGAGAAAGGTGTTGCCGCAATGA TTCGCCGCAAAACACCTTATCTGCTGATGTATGTGGTCATTATCGCCATCATGGGCTGGATGTTCACCATGATCCCATCTTCGTTCTTACCCGAAGAAGA TCAAGGTGTACTCTTTGCTCAAGTACAAACACCTGCCGGTTCCACTGCTGAACGCACCTATGATGTCGTCAGTAAAATGCGTGATTACCTGCTGACTGAA GAATCCGATACGGTGCGCTCAGTGTTTGCCATCACAGGCTTTAACTTTGCCGGTCGTGGACAAAACTCAGGTATGGCGTTTATTGGTCTGAAGCCTTGGG AAGAGCGCACCCTTGAGCACCAAAGTGTGTTCTCGCTAGCACAGCGTGCGCAGATGCGTTTCTTCTCCTTCCGTGATGCCATGGTGTTTGCTTTTGCACC ACCAGCAGTGATGGAACTGGGTAACGCCACTGGCTTTAATATGTTCTTACAAGACCGCGCCGGCGTAGGTCATGAAATATTAAGCGAAGCACGTGATACG TTTGTGCAACTGGCAAACGAAGACCCTCGTTTAACCCAAGTGCGTGCCAACGGCCTGCGTGATGAGCCGCAATATAAGCTGATCATTGATGATGAGAAAG CCAGCTCTATGGGCTTATCACTCGATGCTATCAACCAAACGCTATCAGCGGCTTGGGGTAGTAGCTATGTGAATGACTTTATTGATCGGGGTCGAGTGAA AAAAGTCTTTATGCAAGCCGAAGCCGATGCACGGATGAATCCTGAAGATCTGGCGAAATGGTATGTGCGCAATGATAAAGGCGAGATGATCCCCTTTAAT AGCTTTGCCAGCGGCGAGTGGACCTACGGCTCACCGAAACTGTCACGCTACAATGGTGTACCTGCCATGGAGATTCTCGGTAGCGCAGCACCGGGTTATA GTTCCGGTGATGCAATGCTTGCAGTTGAGGAGATTTCTAAGAAACTGCCCACTGGCGTAGGTATGGCATGGACCGGTTTATCCTACGAGGAACGGCTGTC TGGTGACCAGGCTCCTGCTTTGTATGCTCTATCGTTACTGGTCGTATTCCTTTGCTTAGCGGCAATGTATGAGAGCTGGTCTGTGCCCTTCTCTGTAATG TTGGTTGTACCACTGGGTATTCTAGGTGCGCTACTGGCCACTTACGGACGCGGCTTATCCAATGACGTGTACTTCCAAATTGGCTTACTGACCACCATTG GCTTGTCAGCACGTAACGCTATTTTGATTGTGGAGTTTGCCAAGTCGTTACATGAAGAAGGCATGAGCTTGGCTGCTGCTGCAGTCGAAGCCAGCCGTAT TCGTTTGCGACCAATCATTATGACCTCGCTGGCCTTTATCCTTGGTGTGACACCTCTGGCTATCTCTACCGGTGCCGGAGCGGGCAGTAAGCATGCCATT GGTACAGGTGTCATTGGCGGTATGTTAACGGCAATGGTACTGGCCATCTTCTTTGTGCCTATGTTCTATGTCGCGGTCAGCGCTCTGTTTAAAACAGCTG AAGACAAAAAGGAGGACGCGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCGTACTGCCCTAGCCGTTGCGTTATTAACAGCTTTGTCTGGCTGTTCATTAATCCCGAACTACCAGCAGCCTGAAGCTCCAGTTGCAGAACAATGGAG TGATGTGCAGAATCAACAAGGCGGCGCAGAGCTGCCTGATTGGCGCGAGTTTTTCCAAGATCCGGCTCTTCAGCAGCTGATTGAAACCGCTCTTGAAAAC AACCGTGACATGCGCATTGCTGCACTGAATGTTGAAGCATTTCGTGCGCAATACCGTATTCAGCGTAGTGCGCTGTTCCCTGCAATTGATGCAAGCGGCG GTGCCAATCGTCAGCGTATTCCAGGCAATATGAGCCCAACGGGCGATTCCACCATTAACAGTCAATATTCTGCGGCATTAGGAATAACGGCGTGGGAAGT AGACCTTTTTGGCCGCTTAAACAGCCTGCGTGAGCAAGCTTTGGCCAGTTATTTCGCTAGCGAGCAAGCGCAGCGCAGCACCCAACTCAGTCTGATTAGC
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| Amino Acid Sequence |
>multidrug transporter
MSNFFIDRPIFAWVLALVIMLIGGLAILKLPVNQYPSIAPPAVGISVSYPGASAQTVQDTVVQVIEQKMNGIDGLRYISSESNSDGSMSITITFEQDVDP DIAQVQVQNKLQLATPLLPQEVQQQGIRVTKSAKNFLMVVGIISEDGSMNRYDLADYTVSNIQDPISRTQGVGDFQIFGAQYAMRIWLDPIKLTNFAMTP IDVATAIRAQNVQVSSGQLGGLPASPNQQLTATIIGKTRFETPEQFENILLKVNQDGSQVRLKDVARVELGGENYSINAEYNGKAATGIGIKLATGANAL DTARAVRATLAELEPFFPQGMKIVYPYDTTPVISASIEGVIYTLIEAFILVFLVMYLFMQNLRVTLIPALAVPVVILGTFGVLAAFGYSINTLTMFAMVL AIGLLVDDAIVVVENVERVMEEEGLSPLEATRKSMGQIQGALVGIGLVLSAVFIPMAFFEGSTGAIYQQFSVTIVSAMVLSVLVALIFTPALCATMLKPI KKGGNIEKRGFFGWFNRSFQRGVNKYEKGVAAMIRRKTPYLLMYVVIIAIMGWMFTMIPSSFLPEEDQGVLFAQVQTPAGSTAERTYDVVSKMRDYLLTE ESDTVRSVFAITGFNFAGRGQNSGMAFIGLKPWEERTLEHQSVFSLAQRAQMRFFSFRDAMVFAFAPPAVMELGNATGFNMFLQDRAGVGHEILSEARDT FVQLANEDPRLTQVRANGLRDEPQYKLIIDDEKASSMGLSLDAINQTLSAAWGSSYVNDFIDRGRVKKVFMQAEADARMNPEDLAKWYVRNDKGEMIPFN SFASGEWTYGSPKLSRYNGVPAMEILGSAAPGYSSGDAMLAVEEISKKLPTGVGMAWTGLSYEERLSGDQAPALYALSLLVVFLCLAAMYESWSVPFSVM LVVPLGILGALLATYGRGLSNDVYFQIGLLTTIGLSARNAILIVEFAKSLHEEGMSLAAAAVEASRIRLRPIIMTSLAFILGVTPLAISTGAGAGSKHAI GTGVIGGMLTAMVLAIFFVPMFYVAVSALFKTAEDKKEDAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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