Pseudomonas caeni DSM 24390, H591_RS0103410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas caeni DSM 24390 H591DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AACTGTTAGGCCATGGTGACATGTTGTATTTACCACCTGGCACCAGTTTGCCGATTCGTGTGCACGGCGCTTTCGTTTCTGACGAAGAAGTACACCGTGT CGTGGATGCATGGAAGCTGCGCGGCGCACCCAACTACATCGAAGAGATTCTGGCGGGCGTTGAAGAAACTGGAAGCGGTTTTGATGGCGGTGATGGCGAC AGCAGCAACGAAGATGATCCCCTTTACGATGAAGCGGTTAACTTTGTAACGGAAACGCGCCGTGCTTCCATTTCTTCGGTACAGCGCAAATTTAAAGTCG GTTATAACCGTGCTGCACGCATGGTTGAGGCTATGGAAATGGCGGGCGTGGTATCCGCAGCAGCGCACAATGGTTCACGTGAAGTGATTGCGCCACCACC ACGGCGTGATTAAGTAACAGTGCTTGTTAATCGCTTTACTGTGGTTAATCAGTAAAGCGTCACCTTTAAGCCCAGATAAAAGAGAGTATCGATGCGCACA
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| DNA Sequence for Gene |
>H591_RS0103410
ATGTATAAAGGTTTTTTAGGCTTGATCAGCAACGTGATGCTCAGTGCCGCACTGTTGCTGCCTGTTTCGATCGCTCAGGCAGATGACGGTGAGCAACAAC GCGCGGCCAATAAACTCAGTGAGTTACTCAGTCATACACAAACCATTACCGGTACCTTTTCACAACTGACTTTGGATTCCACTGGCACTCAGTTGCAAGA GGCATCAGGACAGATGGTGTTGCAGCGCCCTGGTTTGTTTCGCTGGCACACGGATCCACCATTGGAGCAGCTATTGATTTCTAATGGTGAGAAAGTTTGG TTGTATGACCCAGACTTACTGCAAGTGACTGTGCAGAAAATGGATCAGCGCTTAACCCATACGCCAGCCTTATTACTGTCTGGTGATGTGTCGAAAATCA GTGAAAATTTCAGTATCACTTATAAAGAAGGTGGTCCGGTAATTGATTTTATTTTAACGCCAACCGCGAAAGATACTCTGTTTGATACGCTGCGTTTATC CTTCCGCAATGGCGTAATCAATGACATGCAGCTGCTCGATGCCGTTGGTCAGCGCACTAATATTTTGTTTATGGGCGTTAAAGTTAATGAGCCGGTGGAT GCCAGTCAGTTTGTCTTTGATGCACCGGCAGGGGTTGATGTCATCGAGGATGGGGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGTGCAACTGTTTAGCAGTGAGCCGGTTGCCCAACCATTGGCTGCGCGTTTGCGTGCCAATACTTTAGATGAGTATGTCGGTCAGCAGCATATTCTAGC TGTGGGCAAGCCCCTGCGCGAAGCCTTGCAGCAAGGCGCTTTGCACTCGATGATTTTTTGGGGTCCGCCAGGGGTGGGCAAAACCACTCTGGCACGCTTG CTGGCGCAGGTCAGTGATGCGCATTTTATTACCCTGTCGGCGGTGTTGTCAGGGGTGAAAGAAATTCGCGAAGCGGTGCAAGAAGCCAAGCAGCAGTCGG CGCAATACAGTCGCCGTACCATCTTATTTGTCGATGAGGTGCACCGCTTTAATAAAGGTCAGCAAGATGCGTTTTTGCCTTATGTGGAAGACGGCACCTT TATTTTTATTGGCGCTACCACCGAAAATCCCTCTTTTGAACTCAATAACGCTTTGTTGTCGCGGGCACGTGTCTATGTCTTAAAAAGCTTAGATGACCAA
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| Amino Acid Sequence |
>membrane protein
MYKGFLGLISNVMLSAALLLPVSIAQADDGEQQRAANKLSELLSHTQTITGTFSQLTLDSTGTQLQEASGQMVLQRPGLFRWHTDPPLEQLLISNGEKVW LYDPDLLQVTVQKMDQRLTHTPALLLSGDVSKISENFSITYKEGGPVIDFILTPTAKDTLFDTLRLSFRNGVINDMQLLDAVGQRTNILFMGVKVNEPVD ASQFVFDAPAGVDVIEDGE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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