Pseudomonas sp. URIL14HWK12:I4, H025_RS0119135
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 180 | 620 | 6.0E-44 |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 161 | 620 | 5.5E-87 |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 21 | 156 | 1.2E-33 |
| CDD | cd01347 | ligand_gated_channel | - | - | 49 | 620 | 1.76237E-73 |
| PANTHER | PTHR30069 | TONB-DEPENDENT OUTER MEMBRANE RECEPTOR | IPR039426 | TonB-dependent receptor-like | 13 | 620 | 3.6E-92 |
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 43 | 147 | 4.8E-29 |
| SUPERFAMILY | SSF56935 | Porins | - | - | 30 | 619 | 8.01E-111 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.