Pseudomonas sp. URIL14HWK12:I4, H025_RS0117275
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I4 H025DRAFT_scaffold00012.12_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCCGCCAGTTGCTTGACCAACTGAAGGCCCAAGGCCTCAGGGTAGCCTTGGACAGCAGCGGCGAAGCCTTGCGTGCGGGCCTGCAAAGCGCGCCTTGGC TGGTCAAGCCCAATACCGAAGAGTTGGGCGAGGTACTCGGCCTGGCTGTGGATAACCCGGCGCAGCAACGTGCAGCCGCCGAGCACCTGCTGGCCAGCGG CGTCGAACATGTGGTGGTGTCTGCAGGTGAGCAAGGGGTCAGCTGGTTCGCCCGCGATCTGGCCGTACACGCAAGCCCACCCAAGGTGCGGGTCGCCAGC ACGGTGGGGGCGGGGGATTCGCTGGTAGCCGGCATGGTCCATGGCCTGCTGCAGGGCGAGCTGCCTGCGCAGACGTTGACCCGTGCCACCGCGATTGCCG CCCAGGCCGTCACCCAGGTTGGCTTCGGCATCCGTGACCGCGAGCAACTGGCGCGTCTGGAAGCGGCCGTGCAACTGACAGAACAACAAGAGGGTTGCCG
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| DNA Sequence for Gene |
>H025_RS0117275
ATGAACATTGCCATTGTCACCGCCTGCCCCAACGGCCAGGTGTCGAGTGTGCTGAGCGCACGTTTGTTGTCCGCCGCTGCCCAGCGGCGTGGCTGGAGTA CCAGCGTCGAAGTGCAGGAAGCCGGGCACCCGGAGCGGCAACTGAGTGCGCAGCAGATCGCCGAGGCCGACTGGGTGCTGGTAGTCAGCACTGGCGCAGT GGACCTGGCCCGCTTTGTCGGCAAGCGCGTGTACCAGAGCACACCCTCCCAGGCGCTGGCCGACCGTGAAGGCTTCCTCGATGAGGCAGCAGCCAACGCC CAGCCGTTGGTGGCGGCATCAGACGCCCCAGTCGCTGTTGGCAGCGCTGTCACGCGAATCGTTGCGGTCACTGCTTGCCCGACCGGCGTCGCGCACACAT TCATGGCCGCAGAAGCCTTGCAGCAAGCGGCACAACAGATGGGATACCAACTCACGGTCGAAACCCAGGGTTCGGTCGGGGCGCGCAATCCCTTGTCTGC CGAGGCCATCGCAGAGGCGGATGTGGTGCTGCTGGCCGCTGACATCGAAGTGCCCACTGCACGGTTTGCCGGCAAACGTATCCACCGTTGTGGCACTGGC ATCGCCCTCAAGCAAGCCCGCGCCACGCTGGACAGGGCTCTGGCCGAAGCCAAAGTGGAAAGCAGCGCCGATGCCGCAGCGGCTGCCAGTACGACAAAGG GTGAGAAGACCGGTGTGTACAAGCACCTGCTGACCGGGGTGTCGTTCATGCTGCCCATGGTGGTGGCCGGTGGGCTGCTGATTGCCCTGTCGTTCGTGTT CGGCATCGAGGCGTACAAAGAACCAGGCACCCTGCCGGCGGCGTTGATGCAGATCGGCGGCGAGGCCGCGTTCAAGCTGATGGTACCGCTGCTGGCGGGC TATATCGCCTGGTCCATCGCCGACCGCCCGGGGCTTGCGCCTGGCATGATCGGTGGCCTGCTGGCCAGCACCTTGGGGGCCGGTTTCATCGGCGGCATCG TCGCGGGCTTTCTTGCCGGTTGCAGCGCCAAGGCCATTGCCCGCTGGGCGCGCCTGCCCACCAGCCTGGAAGCGCTGAAGCCGATCCTGATCATTCCGCT GCTGGCCAGCCTGTTCACCGGCCTGGTGATGATCTACGTGGTGGGCCAGCCGGTGGCGGCCATGCTCGAAGGGCTTACGCACTTCCTCGACAGCATGGGC ACCACCAATGCCATCCTGTTGGGGCTGTTGCTGGGAGGCATGATGTGCGTCGACCTTGGCGGGCCGATCAACAAGGCCGCCTATGCCTTCTCGGTGGGGT TGCTGGCGTCGTCGAGCTACGCACCGATGGCGGCGACCATGGCCGCCGGCATGGTGCCGCCGATAGGCCTGGGCATCGCCACTTTCCTGGCCCGGCGCAA GTTCGCCCAGAGCGAGCGCGAGGCAGGCAAGGCGGCGTTGGCGCTGGGGCTGTGCTTCATCTCTGAAGGGGCGATCCCGTTTGCAGCCAAAGACCCGCTG CGGGTGATTCCGGCCAGTGTCGTGGGTGGCGCATTGACCGGGGCGCTGTCGATGTACTTCGGCTGCAAGCTGATGGCGCCCCATGGCGGCTTGTTCGTGT TGCTGATCCCCAATGCGATCAACCATGCACTGCTTTACCTGCTGGCGATTGTAGCGGGTAGCCTGGTGACGGCGGTGGTGTATGCGGTGATCAAGAAGAG CGAGCGGGTGGAGTTGGCGGTGGCACCCGTAAAAGGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGAATTCTGGAGGCATTACTGGCCTCTTCGCGGCCAAGCCCGCGAAGAGGCCGGAGCAGGTCACCGCCGATGCTTCTGCCGCAACGGCACCAACAGATCA CCCAACCCGTTGTGGTCGATCTCATGCATCAATGCCAGCAACCCACCCAGCTCCCCCGCCGGAAAGCCCTTGCGCGCAAACCACGCCAGGTAGTCTCCCG GCAGGTCGGCAATGATCCGTCCCTGATACTTGCCAAACGGCATGGTCCGGGTCACCAGCAGTTCGAGGGTTTCCGGCTTCATCGTCGATGCACCTGGCTG TGGAAAAGCGCCGACCATACTGCAATCTGCACGAGTGCCCAAGCGGCAATCATGCAGAACGCCCTTGTCAGCTATCATCCTGAATTGAATAAGTTATTGA AAATGATGGATTTATTTTTTGATTGAGGCTTGGCACGAACACTGCTCCCTTACAGATGACTATCACCTGCCAAGGAGTTCGTACCATGAGCAACCCCAAC
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| Amino Acid Sequence |
>FruA
MNIAIVTACPNGQVSSVLSARLLSAAAQRRGWSTSVEVQEAGHPERQLSAQQIAEADWVLVVSTGAVDLARFVGKRVYQSTPSQALADREGFLDEAAANA QPLVAASDAPVAVGSAVTRIVAVTACPTGVAHTFMAAEALQQAAQQMGYQLTVETQGSVGARNPLSAEAIAEADVVLLAADIEVPTARFAGKRIHRCGTG IALKQARATLDRALAEAKVESSADAAAAASTTKGEKTGVYKHLLTGVSFMLPMVVAGGLLIALSFVFGIEAYKEPGTLPAALMQIGGEAAFKLMVPLLAG YIAWSIADRPGLAPGMIGGLLASTLGAGFIGGIVAGFLAGCSAKAIARWARLPTSLEALKPILIIPLLASLFTGLVMIYVVGQPVAAMLEGLTHFLDSMG TTNAILLGLLLGGMMCVDLGGPINKAAYAFSVGLLASSSYAPMAATMAAGMVPPIGLGIATFLARRKFAQSEREAGKAALALGLCFISEGAIPFAAKDPL RVIPASVVGGALTGALSMYFGCKLMAPHGGLFVLLIPNAINHALLYLLAIVAGSLVTAVVYAVIKKSERVELAVAPVKG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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