Pseudomonas sp. URIL14HWK12:I4, H025_RS0112985
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I4 H025DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCTGGCCGGCAGCAATCAGGCTGCCTTGCTGGGTCAGGCGGCTTTGCGCCTGTGCGTATTCGGCTTCGCGGGTGGCGAGGGCGGCGTGGGCGCGCTCA ACCGCCAGCTCGAAGTCGGCGGCTTCCAGGCGCACCAGCAGGTCGCCTTTGTTGACGTGCTGGTTGTCCTCGACCGGCACCGTGTCGATGCGGGCGCCCA GCTGGCTGGAAATGCGCGTGATTTCGCCCTGCACATAGGCGTTGTCGGTGCTCTCGTAGAAGCGGCCTTTGAAGTACCAGTGGGCCAGGAAGGCGAGGGC GATGAGGGCCACGAGGGTGAAAAAGACCAGCAGGCGGCGTTTGAGTTGGGCGGGCATGGGGACTATCGTTCCAGAAATGTAAATAAATTTAACAGCGGCA CAGGGCCTGTCGACAAGTGACGTTCGCGCCATTGCTGGAGCCCGGTGCCTGCCTCCTGCTAACATCCCGCCTTTGTTTCATCTTTCGTTCGAGACCTTCC
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| DNA Sequence for Gene |
>H025_RS0112985
ATGACCACCGTACGCACGCGTATCGCGCCATCGCCTACCGGCGACCCCCATGTCGGCACTGCCTACATCGCCCTGTTCAACTACTGCTTTGCCAAGCAGC ACGGCGGTGAGTTCATCCTGCGCATCGAAGACACCGACCAGCTGCGTTCCACGCGCGAGTCGGAACAGCAGATCTTCGACGCCCTGCGCTGGCTCGGCAT CGAATGGAACGAAGGCCCGGACGTCGGCGGTCCGCACGGTCCGTATCGGCAGAGCGAGCGTGGCGAGATCTACGCCAAGTACGCCAAGGAACTGGTCGAC GCCGGCCACGCCTTCTACTGCTTCTGCACCGCTGAAGAGCTGGATCAGATGCGTGCCGAGCAGCAAGCCCGCGGCGAAACCCCGCGCTACGACGGTCGCG CATTGCTGCTGAGCGCCGAGGAAGTGCAGCGCCGCCTGGCCGCTGGCGAGCCACACGTGATCCGCATGAAGGTGCCGAGCGAAGGCATGTGCGTGGTCCC GGACATGCTGCGCGGCGATGTCGAAATCCCGTGGGACCGCATGGACATGCAGGTGCTGATGAAGAACGACGGCCTGCCGACGTACTTCCTGGCCAACGTG GTAGACGACCACCTGATGGGCATTACCCACGTACTGCGTGGCGAAGAGTGGCTGCCGTCGGCGCCCAAGCTGATCAAGCTGTATGAGTACTTCGGCTGGG AACAGCCAAAGCTGTGCTACATGCCGCTGCTGCGTAACCCGGACAAATCCAAGCTATCCAAGCGCAAGAACCCGACCTCGGTCACCTTCTACGAGCGCAT GGGCTTCATGCCCGAGGCGATGCTCAACTACCTGGGCCGCATGGGCTGGTCGATGCCGGACGAGCGCGAGAAGTTCTCGCTGGCCGAAATGGTCGAGCAC TTCGACCTGTCGCGCATTTCGCTGGGCGGGCCGATTTTCGACATCGAGAAGCTGTCGTGGCTCAACGGCCAGTGGCTGCGCGAGCTGCCGGTCGAGGAAT TCGCGGCACGCCTGCAGAAGTGGGCATTCAACAGCGACTACATGATGAAGATCGCGCCGCATGTGCAGGGCCGTGTGGAAACCTTCAGCCAGGTTGCCCC GCTGGGCGGGTTCTTCTTCGAAGGCGCGCTGAAGCTGGATGCCAAGCTGTTCGAAAGCAAGAAACTGTCGGCCGACCAGGTGCGTCAGGTGATCCAGCTG ATCCTGTGGAAGCTCGAAAGCCTGCGCCAGTGGGAAAAAGAGCGCATCACCGGCTGCATCCAGGCCGTGGTCGAGGCGCTGGAACTGAAGCTGCGTGACG CCATGCCGCTGATGTTCGCCGCCATCACTGGCCAGGCCAGTTCGGTTTCGGTACTGGACGCCATGGAAATCCTTGGCCCGGACCTTACCCGCTACCGCCT GCGTCAGGCTCTGGACCTGCTGGGTGGCGTGTCGAAGAAAGAAAACAAGGAGTGGGAAAAGCTGTTGGCCTCGATCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGCGTTTCCCAGCCTGTAGCTGAAACCTGTGGGAGCGGGTTCGCCCGCGAATACGATGGCGCTTGCACTGCCGCATTCGCGGGTAAACCTGCTCCCACA GGGTTCGATGCTGGGGTTTTGGTAGGGCAGGGCGGTAAGTGATTGTTATCTGTGAAAATTTTTTTGATTATTTTAAAAAATTAGTTTGACAGCCCTGCAA TCCGAACTTAATATGCGCCCCGTCCACAGCGATGAACGAAAACGAAACGCCAGCCACCCAGCCAGCGATTCTGTTCAGAGCGACATTGTGGGGCTATAGC TCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAAATTCCGCTTACCAGCCAAGGCTGATAAGCAAGAC CGGGTCCAGCAACCGGGTCTTGAAGGTAAGAAGGTTCGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCC
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| Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFDALRWLGIEWNEGPDVGGPHGPYRQSERGEIYAKYAKELVD AGHAFYCFCTAEELDQMRAEQQARGETPRYDGRALLLSAEEVQRRLAAGEPHVIRMKVPSEGMCVVPDMLRGDVEIPWDRMDMQVLMKNDGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLIKLYEYFGWEQPKLCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLAEMVEH FDLSRISLGGPIFDIEKLSWLNGQWLRELPVEEFAARLQKWAFNSDYMMKIAPHVQGRVETFSQVAPLGGFFFEGALKLDAKLFESKKLSADQVRQVIQL ILWKLESLRQWEKERITGCIQAVVEALELKLRDAMPLMFAAITGQASSVSVLDAMEILGPDLTRYRLRQALDLLGGVSKKENKEWEKLLASIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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