Pseudomonas sp. URIL14HWK12:I4, H025_RS0105580
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I4 H025DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACGCAACACGCCCCGCCGCCTCAAGGTGAGTGGCGCCCATCAGAAAGCGGGTATGGGCTGCGTGCCACGTGATCAGGGCGCTGGCGCACATCATGAAGA TTTGTTCATGGCTAACCCTTGGTGAAGAGGATTGAGCTCGATTTTGGTGTATTTATGGATCCATAAATAAAATTTGTGCGATAAACGAACAAGAAATCTT TTTCGGTATAAATATGTAAGATGTTGAAAATAATCAATAAAAATTGATTTTTTGTCGTTTTGTTTCTTTGCTCACCGCGTTACACCCTGAGCCTTCACCC TTGAAGTGATTGTTTGTGGATCCACTATCTGGTTGATTAGCGCCTGACAACGGCCGGATCCCTCCAGCCGTATGCGACAACAATTACAAAAAGGGTCCAG TCATGAGTGGCTTTCCAAGGGGACGGAACCGTCAGGGTTCCTTGCGCTTTGCCTGCGTGTGCGTATCTGTTCTCCCACCTGTGAACCGGCAGGTGACCTT
|
|
| DNA Sequence for Gene |
>H025_RS0105580
ATGAATGCCGATCTCAAGCAACGCCTGGACAACGACCCGATGGGCCGCTTCCAATGCCTGGCCATTGGTATTTGCATCATCCTCAACATGATCGATGGCT TCGACGTACTGGTGATGGCCTTCACGGCTGCCTCGGTGTCTGCCGAGTGGGGCCTGAACGGGGCGCAGGTAGGGCTGCTGCTCAGCGCCGGCCTGTTCGG CATGGCGGCCGGCTCGTTGTTCATTGCGCCGTGGGCCGACCGCTTTGGCCGCCGCCCGCTGATCCTGCTGTGCCTGGGGCTGTCGGGTATCGGCATGCTG CTTTCGGCGATGAGCCAAAGCCCGCTACAGCTGGCGTTGCTGCGTGGCCTGACCGGGCTGGGCATCGGCGGCATCCTGGCCAGCAGCAACGTGATTGCCA GTGAGTACGCCAGCAAACGCTGGCGCGGGCTGGCGGTGAGCCTGCAGTCCACCGGCTACGCCCTGGGCGCGACGTTGGGTGGCTTGCTGGCGGTGTGGCT GCTGGGGCAGTGGGGCTGGCGCTCGGTGTTCCTGTTTGGTGGCATTGTCACCGTGCTGGTGATCCCGCTGGTGCTGCTGTGGTTGCCGGAGTCGCTGGAC TTTCTGCTGGCACGTCGCCCGGCTAATGCGCTGGCACGGGTCAATCGCCTGGCCGTTCGCCTCGGCCAGCCGGCGCTGGCACAACTGCCAACACCCACTG AAAGTAAGCAGGGCGCCGCCAGCGGCTTCCGGCAACTGCTGGCGCCTGACATGCGCCGCACCACGCTGGTGATCTGGCTGCTGTTTTTCCTGGTCATGTT CGGCTTCTACTTCGTCATGAGCTGGACGCCGAAACTGCTGGTCGCCGCTGGCCTGTCGGCACAGCAGGGCATTACCGGCGGGGTGCTGCTGAGCGTCGGC GGCATCCTCGGCGCGGCGCTGATCGGCGGCCTGGCTTCGCGTTGGCCACTCACGCGGGTGCTGGCGTTGTTCATGCTTATCACCGCAGCGCTGCTGGTGT TGTTCGTGGTCAATGGCGCGTCGGTCAGTGCGGCGCTGGCGCTGGGGCTGCTGATCGGGCTGTTTTCCAATGGCTGCGTGGCCGGGCTGTATGCGTTGTC GCCGGTGGTCTATGACGCTTCGGTACGTGCAACAGGCGTGGGCTGGGGCATCGGCATCGGGCGCATGGGGGCGATCCTGTCGCCCACCGTGGCGGGTGTG TTGCTCGATGGCGGCTGGCAACCGCTGCACCTGTACGGAGTGTTCGCCAGCGTGTTCGTGCTGGCGGCAGGGTGCCTGCTGTTGCTGCGGCCAGCGGCCA AGCCGGCACCTGCTCTACCTACCGATGCATTGAGCCACTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTGCCGCCCGGCCTGGCCGGGCACCTGAATGCAGCTTATCGCCCCAGGTGTCTGTTGGCCTGGGGCGGGCGGCTGCGCCCAAGTAAAGCGGAGAACAATA ATAATGATGCACACAACTTGCACGCTGGCCCGTTCGGTTCTGGCGGTATCGCTGGCGCTTGGCCTGGGTTTGCCGGCCTGGGCCGAGGAGGGGGGCTTCC TTGACGATGCCAAGGCCGGGCTGACCCTGCGCAACTACTACTTCAACCGCGATTTCCGCGACCCGGGGGCGGCCAAGGGCAAGGTCGAAGAATGGGCTCA GGGCTTCATCTTCAAGTTCAGCTCTGGCTACACCCCGGGGTTGATCGGTGTTGGCCTGGACGGTATCGCCATGTTCGGTGTGAAGCTGGACAGCGGCGGT GGCACCAGCGGTTCCGAATTGCTGCCGGTGCACGATGACGGGCGTGCAGCCGACAACTATGGCCGGGCAGGGTTGGCGGCGAAGCTGCGTATCAGCGCGA
|
|
| Amino Acid Sequence |
>MFS transporter
MNADLKQRLDNDPMGRFQCLAIGICIILNMIDGFDVLVMAFTAASVSAEWGLNGAQVGLLLSAGLFGMAAGSLFIAPWADRFGRRPLILLCLGLSGIGML LSAMSQSPLQLALLRGLTGLGIGGILASSNVIASEYASKRWRGLAVSLQSTGYALGATLGGLLAVWLLGQWGWRSVFLFGGIVTVLVIPLVLLWLPESLD FLLARRPANALARVNRLAVRLGQPALAQLPTPTESKQGAASGFRQLLAPDMRRTTLVIWLLFFLVMFGFYFVMSWTPKLLVAAGLSAQQGITGGVLLSVG GILGAALIGGLASRWPLTRVLALFMLITAALLVLFVVNGASVSAALALGLLIGLFSNGCVAGLYALSPVVYDASVRATGVGWGIGIGRMGAILSPTVAGV LLDGGWQPLHLYGVFASVFVLAAGCLLLLRPAAKPAPALPTDALSH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|