Strain | Pseudomonas sp. LAIL14HWK12:I7 D886DRAFT_scaffold00008.8, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCGACGAGTTTCAGGAATTGGGCTTCGAGCTGAACCTGGACTTCAAGGAAGATCTGGATGACCAGGCAATCGATGCATTCCTCGATGCCTTCCTGGAAG AAGCCATGGACGCCAATGGCCTCGACTACGTAGGCGGTGACGATTTCGGCCTGGTGTGCTCGGCCAAACGCGGTTCGGTCAGCGAAGAACAACGCGCTGC CGTCGAAGCCTGGCTCAAAGGCCGTGGCGAACTGACCAAGATCGAAGTCAGCCCACTGCTCGACGCCTGGTATCCGGACAAGCCGATCAACGCGGCTGAG TGATACCTGTGCGGCACCCAGCGGCTTGAACGCTGAAAAGGCCACCCTTTGCGGTGGCCTTTTTTGTGGGTGGCGTTTTCCGTCGAACGTGGCCCATCGT GGCTACGCTTGGGGCATAATGCGCGTTCTATTACGTTCTGGGGCCATCATCTCTTACAGCCCCAATGTCCTTTTCCCTCGCCGCAGGGTATTTACTGAAT
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DNA Sequence for Gene |
>D886_RS0125875
ATGATCAAAACGCTCCGTCCCCTCGTTCTCGCCGGCCTGCTGCTGCCCTTCGCCTTGCCCAGCCAGGCCGCCGCCGTCAATACCAGCCTGCCGCCCAAGG TGCAGCAGGCGCTGAAAGCCAACAAACTGCAGGACACCGCACTGTCGCTGGTGATGCTGCCGCTGGATGGGCCTGGCGCGGCGACGGTGTTCAATGCCGA TGTGTCGGTAAACCCGGCCTCGACCATGAAACTGGTCACCACCTACGCGGCCCTGGAACTGCTCGGCCCGACCTTCCAGTGGAAAACCGAGTTCTACACC GACGGCACCCTGAGCAACGGTGTGCTCAACGGCAACCTCTACCTCAAAGGTGGCGGCGACCCCAAACTGAACATGGAAAAACTCTGGCTGCTGATGCGTG ACCTGCGCGCCAACGGCGTGCGCACCATCACCGGTGACCTGGTGCTGGACCGTAGCCACTTCGTACAGCCTAACCTGCCGCAGTTCAACGATGACGGCGG TGACGTCAACAAGCCCTTCCTGGTCAAACCCGACTCGCTGCTGGTCAACCTCAAGGCACTGCGCTTCGTTGCCCGCAACGATGGCGGCAAGGTGACGATC GCGGTCGAACCGCCGATTGCCAACATCCGCATCGACAACCAGGTCAAAGCCGTGGCGTCCAAGCAGTGCACCGGTGATGTGCGCTACAACCCTGTGCAAC AGGCCGATGGTGTCAGCGTGGTGGTCAGCGGCCAGCTGGGTGATGGCTGCAACTCGCAGACCTACCTGTCGCTGCTCGATCACCCGGCCTATGCCGCCGG TGCCGTGCGGGCGATCTGGAACGAACTGGGTGGCAGCATTCAGGGCAGCGATCGCGTCGAGAATGTCCCCAAAAGCGCACGCCTGCTGGCACGGGCCTTC TCGCCTGACCTGGTGGAAGTGATCCGCGACATCAACAAATACAGCAACAACACCATGGCCCAGCAACTGTTCCTTAGCCTGGGCGCGCAGTTCCGTACCG ATGCCGATGGCGATGACGCCCGCGCGGCGCAACGTGTAGTGCGCCAGTGGTTGGCGAAAAAGGGCATCACCGCGCCACACCTGGTGATGGAAAACGGCTC CGGCTTGTCGCGCGCCGAGCGCGTCAGCACCCGCGAGATGGCGGCGCTGCTCCAGGCCGCCTGGAAGAGCCCCTACTCCGCCGAGTTCATCAGTTCCATG CCGCTGGTGGGCATGGACGGCACCATGCGCAAGCGCCTGAAACGCACGGCAATGACCGGTGAAGGCCATATCAAGACCGGCACGTTGAACACCGTGCGCG CCATCGCGGGCTTCAGTCGTGATAGCAATGGGCATACCTGGGCAGTGGCGGCGATTTTGAACGACCCGAAACCGTGGGGGGCATCGCAGGTGCTGGACCA GGTGCTGCTAGACCTGTATCGCCAACCGAAGCTGGGTGCTAGCGCTGCGGCCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGTAGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCGGCCCCCTGATTTCAGTGTTAACGCATAAAGTGCGGGGCCGCGTTGCGGCCCTTTCGCGAC GCAAGGCCGCTCCTACACGAGGCTCAGGTCAACTCCGCTTCGACCCGGTCCCGTCCTGCCTGCTTGGCCGCATACACCCCGGCATCCGCCCGCAACAACA ACGCGTCAGCCCCCTCCCCTGGCCGCCAGCCCGCCACACCAAAGCTCGCCGTGACCTCGCCCACCCCCTCGATCGGGACGTTGCGCACGCTTTGCCACAG CTCAAGCGCCAGCAACCGCGCCTGCTCGGCATCGCTGCCTGGGCACAGCACCATGAACTCTTCCCCTCCCAACCGGCAGAACACGTCGGTTCGCCGCAGG CGATGGCCGATGCGCTGGCACAGGCTGCGCAGCACCAGGTCGCCCACCGCATGGCCGAACTGGTCGTTGATGCGCTTGAAGTGATCGATATCGAGCATGA
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Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MIKTLRPLVLAGLLLPFALPSQAAAVNTSLPPKVQQALKANKLQDTALSLVMLPLDGPGAATVFNADVSVNPASTMKLVTTYAALELLGPTFQWKTEFYT DGTLSNGVLNGNLYLKGGGDPKLNMEKLWLLMRDLRANGVRTITGDLVLDRSHFVQPNLPQFNDDGGDVNKPFLVKPDSLLVNLKALRFVARNDGGKVTI AVEPPIANIRIDNQVKAVASKQCTGDVRYNPVQQADGVSVVVSGQLGDGCNSQTYLSLLDHPAYAAGAVRAIWNELGGSIQGSDRVENVPKSARLLARAF SPDLVEVIRDINKYSNNTMAQQLFLSLGAQFRTDADGDDARAAQRVVRQWLAKKGITAPHLVMENGSGLSRAERVSTREMAALLQAAWKSPYSAEFISSM PLVGMDGTMRKRLKRTAMTGEGHIKTGTLNTVRAIAGFSRDSNGHTWAVAAILNDPKPWGASQVLDQVLLDLYRQPKLGASAAAN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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