Pseudomonas sp. LAIL14HWK12:I7, D886_RS0125580
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I7 D886DRAFT_scaffold00008.8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCTGGCCGTGGTCCATGCCTTCATGGTTCATGCCTGCGGTGAACAGCTTACCTTGCATCGCAATCATTTCTTTCTGGTGCTCGGCATGCATGGCCTTGT CGCCCAGGTTGAATTCGTGGGGCAACTTGCCCTCATTGATCAGCACGAAGCGCACCGTCTCGCCCGCCTTGACCTCCAGGCTTTTTGGTTCGAAGGCAAT GTCCTTGAGCACCACCTCGACCGTACGGGTGGCCTTGCCAGCCGGGGCAGGCTCGCCAAAGGCGAAACTGTCGGCACTGCCCGCAAACGTGGGCAGGCTT GCCACGGCAAGGGCGGCGGCGATGAATAGGCGTTTCATGATGACTCCAAAATACACAACGTGATGAGAGCACCTTAATCAGGTGGGGCTGGCGGCTACCT GACGGGAAGATTACAACTTTGTCAGTTTGGGCGAGCGCCGACATCGTCACGTATCATTTCCCGGTAGACGCTGCGCCCCCTCCAGAACTGTGGACACTGC
|
|
| DNA Sequence for Gene |
>D886_RS0125580
ATGAAACTGTTGATCGTTGAAGACCAGGCCCGCACCGGCCAGTACCTGAGCCAGGGCCTCAGCGAGGCAGGCTTCGCCACCGAACTGGCAGCCGATGGCG AAACTGGCCAATACCTGGCACTGACCGGCGACCATGACTTGCTGATCCTCGACGTGATGCTGCCAGGCCGCGATGGCTGGCAGATTTTGCAAGCAGTGCG CCAGGCCGGTCTGGACACCCCCGTGCTGTTCCTGACCGCCCGCGATGCGGTAGAAGACCGTGTGCACGGCCTGGAGCTGGGCGCCGACGATTACCTGGTC AAGCCGTTTGCCTTTTCCGAACTGCTGGCCCGTGTACGCAGCCTGCTGCGCCGTGGCGCCAGCCCGAGCCAGGACACCACCTTGAGCCTGGCCGACCTGC GCCTGGACCTGATCCGCCGCCGCGCCGAGCGCGCCGGCCAGCGCATCGACCTGACCGCCAAAGAGTTCGCCCTGCTCGAACTACTGCTGCGGCGCCAGGG CGAGGTACTGCCCAAATCGCTGATTGCCTCGCAGGTCTGGGACATGAATTTCGACAGTGACACCAACGTCATCGAAGTGGCCATCCGCCGCCTGCGCCTG AAAATCGACGACCCGCACACCAGCAAGCTGATCCACACCGTGCGGGGCATGGGCTATGTGCTGGAGGAGCGTCAGGATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGCGCCGACTTTCCCTCGGCAGCCGCCTGGCGCTGCTGTTCGCGGCCTGCACCGCTGCCGTTTCGCTAGGGGCTGGCGTGCTGTTCAGCCGCGCCAGCGA GCAGCACTTCATCGAACTCGACCAACAGCTGCTGGAATCTCGCCTGTCGCTGTTTCGCACGCAGCTGGCCGGCGTCGTCGGGCCCGCCGAACTGGGCGCC CGCCTCCCCGCCCTGCGCGATGAACTCAGCCACCAGGCCGACTTGGCCCTGCGCATCAGCGGCCATGACGGTAGGCCGTGGTTCGACAGCCGCACGCAAT TGCCCGACACCACGCCACCCTCTGGGCTTGCCACTCTACACACCGACGGCGCCGACTACCGCAGCCTGGCCATGCCCCTGAACCCGGCCGACCCGCAGTC TGCGCAGCTGACCCTGTACCTCGACATCACCCACCATCAGCACTTCCTGCAGGGCATGCAGCGCCTGATCTGGCTAACGGTCGGCCTCTCGGCCCTGGCC
|
|
| Amino Acid Sequence |
>transcriptional regulator
MKLLIVEDQARTGQYLSQGLSEAGFATELAADGETGQYLALTGDHDLLILDVMLPGRDGWQILQAVRQAGLDTPVLFLTARDAVEDRVHGLELGADDYLV KPFAFSELLARVRSLLRRGASPSQDTTLSLADLRLDLIRRRAERAGQRIDLTAKEFALLELLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRL KIDDPHTSKLIHTVRGMGYVLEERQD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|