Pseudomonas sp. LAIL14HWK12:I7, D886_RS0122470
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I7 D886DRAFT_scaffold00002.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGACTTGCCGGTGCCACGCGAGCCCCACAGCAAGGCATGGTTGGCGGGCAGGCCATTGATGAACTGGTGGGTGTTGCGGCCCAGCTGGTCACGTTGCTG GTCGACCCCGATCAGGTCGCTCAGGCGGATGTCCAGGCTGACTTCAAGGGGCATCAGGTAACCGGTGCGGCCATCGCGCTGCCAGCGGGCGGCCAAGGTG GTGTGCCAGTCGATGTCTGGGCGTGGTGCGGGCAACAGCGGCTCAAGGCGCGCCAGTACCGATTCGGCGCGGTCCAGAAAAGCAATCAAGCGAGCGTCCA TGACGACTCCTACAAATTCAGATTCTGGGATGCAGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGTACTGCACAGCGCTGAAGGCTGCGAAATA ACCTGTGGGAGCGGGTTTACCCGCGAAGAGGCCGGCACTGCATACAAGCAATCAAGGTTGAATGTGTGACAGACCCGCCAGCAGCCGGGGCTATTCGGCT
|
|
| DNA Sequence for Gene |
>D886_RS0122470
ATGCTTGCGCAGCGCAAGGGACGTGAAACCGGCTCGGGACTCATGGATATCAAGTTCACCAATCGCCTGTCATACAAGCAAGCCCGGCTGACAGTCCTGG TCGGCTTCATCCTGGGAACATTGCTCAGTCTCATCCAGATCGGCATCGATTATGCCAGCGAAGACGCATCCATCAACCGTGAAGTGCGTGCACTGCTGCA AATCAGCCACAACCCGGCTTCGCGCATCGCCTACAACATCGATGCCGAACTGGCCCTGGAGCTGACCCGCGGCCTGCTGCAATCGCCAGCGGTGATCCGC GCCCGGCTGATCGACAACAACGATACCGTGCTGGCCGACGTCGAGCGCCCACGCCTTGAAGACCGCTACCGCCCGCTCAGCGACTTCCTGTTCGGCGAGC AGCGCCAGCTTCAAGACCGCCTGTTTCTCGCCCATATGCCCAATGAATATCTGGGCACCCTGTACCTGGACGTCGACACCTACGCCTTCGGCAGCCGCTT CCTCGACCGCGCCAGCATCACCCTGCTCAACGGCTTCGCCCGCAGCCTGGTGCTGACCGGGATCCTGCTGGCGCTGTTCTACATGATGCTGACCAAACCG CTGGTGACCGTGATTGGCGCGCTCAGCGGCAGCGACCCGCGCAAGCCGCGGCAAACACGGCTGGAATGCCCCCATGGCCACGAACACGACGAGATCGGCG TGCTGGTCAAAGTCGCCAACCAGCAGTTCATCAGCATGGCCACCGAGATCGAGCAGCGGCGTAACGCCGAAAACCGCCTGACCCAGTACCTGAACGAGCT GGAAGACATCGTGTCGGCGCGCACCGACCAGCTCAAGGCCAGCAACAGCAGCTTGAGCCTGTCCAACCAAGAGCTCGAAGAAGCCCGGCGCCGGGCCCTT GACATGGCCCAGGCGCGCGCGGCCTTCCTGGCCAACATGAGCCACGAGATCCGCACCCCGCTCAACGGCATGCTCGGCATGATCGCCCTGGCCTTGGACA GCCCGCTGCCCAGCGAGCAGCGCCAACAGATGACCATCGCCCACGACTCGGGCAAGGTGCTGGTGGAGCTGCTGAACGATATTCTCGACCTGTCAAAGTT CGATGCCGGCCAGCTGGAGCTCGAACGCATTGCCTTCGACATGGGTTCGATGGTCGAGGACACCGCCAACCTGCTGTCGCAGAACACCGCGCAAAGCGTC GAGCTGACCTGCCTGATCGCCCGCGACTTCCCCAGCAGCGTGCTTGGCGACCCGACACGGGTGCGCCAGATCGTCAGCAACCTGTTGTCCAACGCGCTCA AGTTCACCCGCTTCGGCCGCGTCGACATTCGCCTGGTGACGATTGTCGGCGGTGTACGCCTGGAAGTGCGCGATACCGGCATCGGCATCCCCGAGGAGGC GCAGGCGAGGATTTTCCAACCCTTCACCCAGGCTGGCGCTGGCATCACCCGCCAGTACGGCGGCACCGGCCTGGGCCTGGCACTGACGCGCAACCTGTGC AAGGCGATGCAGGGGCACCTGCATATCCAGTCCGAACCAGGCTTTGGCAGCCGCTTCAGCGCAGAGCTGCCACTGGCCGTGCACACTGAAGCCATCCCGC CGGCGCCGCTGCAGGGCCGCGTGGTGGCCCTGAGCGATGCCAGCAGCGGGCTGCATGAGCTGCTGCAAGACCTGCTGCCCGCCTGGGGCCTGGCGTACCA ACGCCACGACAGCAGCGCAGGCCTGCACACTGCGACGTTCGACCTGCTGATCACCGACGACCTGGAGCACCTGCTGGCGCTGCGCCCTGCACTGAAAACG CCCATCCTGCTGGTGACGGCCTACGGCAATTTCCTGCCCAATGAGCAATCCATCAACCTTGCGCCGCTGCACCAACTGGCCCGGCCACTGGCGCGCAATG CGCTGTACCAGACGCTACGGCGCATCCTGCAAGGCCACGAGCCCGAGCACCCGCTGGCCAACCCGCACACCCCCCCGGAACAAGGCCGTGCACGGATTCT GCTGGTGGAGGACAACCCGGTGAACCAACTGGTGGCCAAGGGCATGCTGGCCAAGCTCGGCTGCCAGGTACAGCTGGCCACCCAGGGCGCCGAAGCCCTG GCGTTGCTAGAACAAGAGGATTTCGACCTGGTGCTGATGGACTGCAACATGCCGGTGATGGACGGCTACGAAGCCAGCCGGCGTATCCGCCAGAGCGGCC GCTGGCCAGACTTGCCAATCGTCGCGCTCACCGCCAATGCCATGCCCGAAGAGCGCGAGCGCTGCCGGGCGGCGGGCATGAACGACTACCTGGCCAAGCC GTTCCGCCGCGAAGAGCTGCTGGCGCTGGTCGAGCACTGGGTGCCGATCAGCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAGGCGCTCGATGTCTGCTTCCAGTGCCTGCGGCTTGGTGGTCGGCGCATAGCGCGTGACCTGGCCACTGGCAGGGTCGACCAGGAACTTGGTGAAGTT CCACTTGATCTTCTGGCTGCCCAGCAGGCCGGGGGCGCGCTGCTTGAGCTCGACGAACAGCGGGTGAGCACCCGGCCCGTTGACCTCGACCTTGCGAAAC AGCGGGAAGCTCACGCCGAAATTGCGCTCGCAAAACTGCGCGATGTCACGCGCTTCGCCCGGCTCTTGCTTGCCAAACTGGTTGCAGGGGAAGCCCAGCA CCACCAGGCCGCGCTCGCGGTAGGCCTGCCACAGCTGCTCCAGGCCTTTGTATTGCGGGGTAAAGCCGCACTGGCTGGCGGTGTTGACCACCAACAGGAC TTTGCCCGGGAAGTCACCGAGCTTCTTGTGCTCGCCCCCCAGGGTCACGCAAGGGATGTCCAGCATCGATCCAGCCATGTTCAGGCTCCGGTCAGTCACG
|
|
| Amino Acid Sequence |
>histidine kinase
MLAQRKGRETGSGLMDIKFTNRLSYKQARLTVLVGFILGTLLSLIQIGIDYASEDASINREVRALLQISHNPASRIAYNIDAELALELTRGLLQSPAVIR ARLIDNNDTVLADVERPRLEDRYRPLSDFLFGEQRQLQDRLFLAHMPNEYLGTLYLDVDTYAFGSRFLDRASITLLNGFARSLVLTGILLALFYMMLTKP LVTVIGALSGSDPRKPRQTRLECPHGHEHDEIGVLVKVANQQFISMATEIEQRRNAENRLTQYLNELEDIVSARTDQLKASNSSLSLSNQELEEARRRAL DMAQARAAFLANMSHEIRTPLNGMLGMIALALDSPLPSEQRQQMTIAHDSGKVLVELLNDILDLSKFDAGQLELERIAFDMGSMVEDTANLLSQNTAQSV ELTCLIARDFPSSVLGDPTRVRQIVSNLLSNALKFTRFGRVDIRLVTIVGGVRLEVRDTGIGIPEEAQARIFQPFTQAGAGITRQYGGTGLGLALTRNLC KAMQGHLHIQSEPGFGSRFSAELPLAVHTEAIPPAPLQGRVVALSDASSGLHELLQDLLPAWGLAYQRHDSSAGLHTATFDLLITDDLEHLLALRPALKT PILLVTAYGNFLPNEQSINLAPLHQLARPLARNALYQTLRRILQGHEPEHPLANPHTPPEQGRARILLVEDNPVNQLVAKGMLAKLGCQVQLATQGAEAL ALLEQEDFDLVLMDCNMPVMDGYEASRRIRQSGRWPDLPIVALTANAMPEERERCRAAGMNDYLAKPFRREELLALVEHWVPISG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|