Pseudomonas sp. LAIL14HWK12:I7, D886_RS0120120
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I7 D886DRAFT_scaffold00002.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGATCGGCTACTGGAATGTCAGCCCCGAGAGCTTCCTCGACCAGCCCACGGCCCAGGTCGACGAGAGCGCCATCGACTACTACGCGATCAATGCCCAC AGCGTGCAGTTCCTGCCCGACGGCAAGTTGCAGTACGAAATGACCGCCGACAAGGTCGAACACCTGACGGCCACCGAGGTCACACTGGTGACCACGCCAG ACCTGCACATGTACCGCGGCACCGAGTACCCGTGGCACGTGCAAAGTGTCCGTGCCGAGGTCAACCCGGACGGCACCGAGGTCGAGCTGATCGACCAGGT GCGCATTGCCCGCACCGACGAAAAGAAGCGTGAAACGATTATCACCAGCTCACGCATGACCGTATTCCCGCAGAAGCAATATGCGCAGACCGAGCAAGCC GTTAGAATCGACGGCGCCGGTGGCACGACCACGGGCAAAGGAATGAAAGCGTATTTGAAAGAAGGCAGGATGGACCTGCTCTCTAACGTAAGAGGACAGT
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| DNA Sequence for Gene |
>D886_RS0120120
ATGAGGCTCGTTAAAACCCTCCCCCTTTTGCTCAGCCTGAGCGCAGCACTGGGAAGCGCGAGCGCCTTCGCACTGCCGACCGACCGTGACCAGCCTATCC GCATCCAGGCCGACAACGCGCACCTGGACGACAAGCAAGGCGTGGCCACCTACACCGGTGACGTCATCATCACCCAAGGCTCGATGATGATCAAAGGCAA CACCGTGACCATGACCCGCGCCGCCAACGGCGACATCGACGTGGTCACCTCGGTGGGCAACCTGGCCTACTTCGAACAGCAGCAGAGCACCGCCAAGCCG GACAAGATGAAAGGCTGGGCCGTGACCATTCAGTACCAGGCGCAGAAAGACACGGTGATCCTCACCGACCGCGCCAAGGTCGAGAATGAAGGCAATACCA CTGAAGGCGAGAAGATCGTCTACAACACCAAGACCCAGGTTGCGACCGCCGGTCGTGGTGGCAACGTGACTCAACCACGTCAGCGCATCGACATGGTGAT CCAGCCGAAGAAGAAGGCCGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATGGCAACCCTCAAAGCCCAGCACCTGGCCAAGAGCTACAAGGGTCGGCAAGTCGTGCGCGACGTCAGCCTGTCGATCGACAGCGGCCAGATCGTCGGCC TGCTCGGCCCTAACGGCGCCGGCAAGACCACCTGCTTCTACATGATCGTCGGCCTGGTCCAGGCTGAGCAAGGGCGCGTGCTGATCGACAACCTCGATGT CAGCCACCAGCCCATGCACGGTCGCGCGCGTGCCGGCATCGGCTACCTGCCGCAGGAAGCTTCCATTTTCCGCAAGCTGTCGGTGGCCGACAACATCATG GCGATCCTCGAGACCCGCAAGGAGCTCGACCGCGACGGCCGCCGCAAGGAGCTGGAAAGCCTGCTGCAGGAGTTCCACATCAGCCACATCCGCGACAACC TCGGCATGAGCCTCTCGGGTGGCGAACGCCGCCGTGTCGAGATCGCACGCGCCCTGGCGACCGCACCGAAGTTCATCCTGCTCGACGAACCCTTCGCGGG
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| Amino Acid Sequence |
>organic solvent tolerance protein OstA
MRLVKTLPLLLSLSAALGSASAFALPTDRDQPIRIQADNAHLDDKQGVATYTGDVIITQGSMMIKGNTVTMTRAANGDIDVVTSVGNLAYFEQQQSTAKP DKMKGWAVTIQYQAQKDTVILTDRAKVENEGNTTEGEKIVYNTKTQVATAGRGGNVTQPRQRIDMVIQPKKKAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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