Pseudomonas sp. LAIL14HWK12:I7, D886_RS0119470
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 320 | 495 | 1.0E-57 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 339 | 494 | 1.41E-47 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 193 | 283 | 6.2E-23 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 323 | 496 | 3.7E-66 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 40 | 190 | 1.3E-18 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 329 | 495 | 3.1E-52 |
| CDD | cd12914 | PDC1_DGC_like | - | - | 69 | 192 | 9.51496E-15 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 331 | 494 | 3.2E-49 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 241 | 494 | 5.6E-67 |
| CDD | cd12915 | PDC2_DGC_like | - | - | 194 | 291 | 1.57242E-21 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 336 | 493 | 2.26415E-62 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 334 | 492 | 3.7E-50 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.