Pseudomonas sp. LAIL14HWK12:I7, D886_RS0111580
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I7 D886DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCGACGCTGCTGGGCCTGGGCTGGAATTTCGAACAGGTGCTGACAGCGCTGCTGGTGCCGGCGGCATTGGCGACGGTGGGTGTGGTCGTGAAAGGGCT GGTCAGCCACGCGGACGCGACCTGAGTGCCGAAGGGGGCCGCTTTGCGGCCCATTCGCAGCACAAGGCTGCTCCTACAGTAGAAATACATAAATGGTTCG ATAATCGCACATAAGGTCGATTATCGGATTGTAAGGGACCTACCAGTCTCCTTAATCTGAACGCACTGATGAACCCTGACCGGGAGTCTCCAAAGCAAGC CGGCACCCCATGAATTCGCTGTCGCTGCGGTTCATTCGGGGGCCAATCTGCGAGCAGATCGTTGCGGCCATCCGCTGGGCGATCCGCTTTGCCGGCGACG TGCAGACCACCACCGAATCCACCCGAATCGAGATGTCCGCCTTACGCGACCTCGAAGCCCATACCGCCGCGGCCCATGGCCAGATGGCAGGAGAAGCCAA
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| DNA Sequence for Gene |
>D886_RS0111580
ATGCGCGACGTATTCATCTGTGACGCCATCCGCACCCCGATCGGCCGCTTCGGCGGCGCCCTGGCCGGCGTGCGCGCCGATGACCTGGCGGCAGTGCCGC TGAAGGCGCTGATCGAGCGTAACCCTTCGGTGCAGTGGGATCAGGTCGACGAAGTGTTCTTCGGCTGTGCCAACCAGGCCGGTGAAGACAACCGCAACGT AGCGCGCATGGCGCTGCTGCTGGCGGGCCTGCCTGAGAGCATTCCTGGCGTGACCCTGAACCGCCTGTGCGCATCGGGCATGGATGCCATCGGCACGGCG TTCCGCGCGATCGCCAGTGGCGAAATGGAATTGGCCATCGCCGGTGGCGTCGAGTCGATGTCGCGTGCACCCTTCGTCATGGGCAAGGCCGAAAGCGGCT ACTCGCGCAACATGAAGCTTGAAGACACCACCATCGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGCGTCGATTCGATGCCGGAAACCGC TGATAACGTCGCTGACGATTACCAGGTGTCCCGCGCCGATCAAGATGCATTCGCCCTGCGCAGCCAGCAAAAGGCCGCCGCGGCCCAGGCTGCCGGCTTC TTCGCCGAAGAGATCGTGCCAGTGCGCATTGCCCACAAGAAGGGCGAAACTATCGTCGAGCGTGATGAACACCTGCGCCCGGAAACCACCCTGGAAGCAT TGACCAAGCTCAAGCCGGTCAATGGCCCGGGCAAGACGGTCACCGCAGGCAACGCATCGGGTGTCAACGACGGTGCTGCGGCACTGATCCTGGCCTCGGC GGAAGCGGTGAAGAAACACGGCCTGACTCCACGTGCTCGGGTACTGGGCATGGCCAGCGGCGGCGTGGCTCCTCGGGTCATGGGCATTGGCCCGGTGCCT GCGGTGCGCAAGCTGACCGAGCGCCTGGGTGTGGCGATGAGCGACTTCGACGTGATCGAGCTGAACGAAGCGTTCGCCAGCCAAGGCCTGGCCGTGCTGC GTGAGCTGGGTGTGGCCGATGATGCGCCGCAGGTGAACCCCAATGGTGGCGCGATTGCCCTGGGCCACCCGTTGGGCATGAGTGGCGCGCGCCTGGTGCT GACCGCGTTGCATCAGTTGGAGAAGAGTGGCGGGCGTAAAGGCCTGGCGACCATGTGTGTGGGGGTAGGCCAAGGTTTGGCGTTGGCCATCGAGCGGGTT TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAGGCTCGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGATCCACGCAATCCTCTGTGGGAGCGGGTTTACCCGCGAAGAGGCCGGATCTATGAGACA CAAGGCTAATGGCCAGCCGCGCAGCGGAACGAGTGTGTTACTAGGTATGTCTAGACTTACCTAGGACCCTCCAGGAGTAAAACCTCATGACCTCAACCTA TTACACCGGCGAAGAACGCAGCAAGCGTATCTTCGCGATCGTCGGTGCCTCTTCAGGCAACCTGGTGGAATGGTTCGACTTCTACGTCTACGCCTTCTGC GCGATCTACTTCGCCCCGGCCTTCTTCCCCTCCGACGACCCCACTGTGCAGTTGCTCAACACCGCCGGTGTGTTCGCAGCGGGCTTCCTGATGCGCCCCA TTGGTGGCTGGATCTTTGGCCGTCTGGCCGACCGCCATGGCCGCAAGAATTCCCTGATGATCTCGGTGCTGATGATGTGCGCCGGGTCCTTGATGATTGC
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| Amino Acid Sequence |
>beta-ketoadipyl CoA thiolase
MRDVFICDAIRTPIGRFGGALAGVRADDLAAVPLKALIERNPSVQWDQVDEVFFGCANQAGEDNRNVARMALLLAGLPESIPGVTLNRLCASGMDAIGTA FRAIASGEMELAIAGGVESMSRAPFVMGKAESGYSRNMKLEDTTIGWRFINPLMKSQYGVDSMPETADNVADDYQVSRADQDAFALRSQQKAAAAQAAGF FAEEIVPVRIAHKKGETIVERDEHLRPETTLEALTKLKPVNGPGKTVTAGNASGVNDGAAALILASAEAVKKHGLTPRARVLGMASGGVAPRVMGIGPVP AVRKLTERLGVAMSDFDVIELNEAFASQGLAVLRELGVADDAPQVNPNGGAIALGHPLGMSGARLVLTALHQLEKSGGRKGLATMCVGVGQGLALAIERV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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