Pseudomonas sp. LAIL14HWK12:I7, D886_RS0108715
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I7 D886DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCACAGCCTGCAGGGCGGCACCACCCACTGGCTGCGCCCGCGCCTGTTGGGCTACGCCGCGGCACTGGTGGTGATGATCGGCGCGCTGGTAGTTGCCTTG CAACTGCGCCCGATGGTGTCGCTGGACGTGATCAAGGACCGTGGCCTGTTCCGCGAGAACGCCCAAGGCCAGATCGAGAACATCTACCTGCTCAAGGTCA TCAACAAGACCGAAAGCACCCAGCGCTATCACCTGCGTCTGCTGGACGCTGACGGCTTCACCCTGCAGGGCAAAACCGAGTTCATCATCCCGGCTGGCGA AATGAGCGAACTGCCGGTCTCGGTGGCGATGCTTGCAGAACGCCCGACCAGCAGTTCGCAAACCTTGAGTTTCGAAGTGCAGGAGAGTGACGAACCTGCC GTGCGCAGCGTGGCACAAAGCCGCTTCGTCGCACCGATGAACCGCTGATCCCTTACACTGTTTTTCCACCTTGCCTGCCAGGCTTCGACAGAAGGCCAGA
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| DNA Sequence for Gene |
>D886_RS0108715
ATGAAACGCTACGAACGATTCGCCGATGACATTGCCGAACTGATCCGCTCGGGTGTGCTAGGCCCTGGCCAGCGGGTGCCCTCGGTGCGCTATGCCAGCC AGACCCACGGGGTCAGCCCATCCACGGTGTTCCAGGCCTATTACCTGCTGGAACGGCGCGGGTTGATCCGCGCGCGCCCGCGTTCGGGGTACTTCGTCAA CGCCCATGCACCGCGCCAGTTCTGCGAGCCGCAGGCCTTGCAGCCGGTCAGCGAGTCCACCGATGTCGACGTCAGCGCGCTGGTGTTCTCCATCCTCGAC TCGATAAAGGACCCCAACACCGTGCCGTTCGGTTCGGCCTTCCCAAGCCCCGAACTGTTCCCGCTGCAGCGTTTGTCGCGCTCGCTGGCCAGTGCCAGCC GTGCGATGGACCCGCGCATGGTGGTCACCGACCTGTCGCCCGGCAACCCTCAATTGCGCCGGCAGATTGCGCTGCGCTACATGGTCGGCGGGCTGATGCT GCCGATGGAAGAGCTGCTGATCACCAATGGCGCGCTGGAAGCCCTGAACCTGTGCCTGCAAGCCGTGACCGAACCCGGCGACCTGGTGGCGATCGAAGCG CCGGCCTTCTATGCCTGCCTGCAAGTGTTGGAGCGGCTCAAACTCAAAGCTGTGGAAATTCCCGTTCACCCCCGCGAAGGCATGGACCTGAGCGTGCTGG CGCAGACCCTGGAGAAGCACCCGGTCAAGGCCGTATGGTGCATGACCAACTTCCAGAACCCGGTTGGCGCCAGCATGCCGGAGGCCAAGAAGCAGGCGCT GGTGGAGTTGCTGGCACGCCATCAGGTGCCGCTGATCGAAGACGACGTCTACGCCGAACTGTATTACGCGCAACAGGCGCCCAAACCCGCCAAGGCCTTC GACACCCAAGGCCTGGTGATGCACTGCGGTTCGTTCGCCAAGAGCCTGGCGCCCGGATACCGCATCGGCTGGGTGGCCGCCGGGCGTTTCGCGCAGAAGA TCGAACGCCTCAAGTTGATGACTTCGCTCTGCGCATCGATGCCGGCACAGGCGGCCATCGCCGACTACCTGCAACACGGCGGCTATGACCGCCACTTGCG CAAGCTGCGCTACGCGCTGGAAGGCCAGCAAGCCAACATGCTCGCCGCCATCTCCCGCCACTTCCCGGCGCAGACGCGGGTCAGCCAACCGTCTGGGGGC TACTTCCTGTGGCTTGAACTGCCAGAGCAGATGGATGCGCTCAAGCTGTTCCACATGGCCTTGGCCCAGGGCATCAGCATCGCGCCCGGCCCCATCTTTT CACCGACCCGTCGCTTCGGTAATTGCATCCGCCTGAACTACGGCAGCCCCTGGCATGACGGCGCCGAAAAGGCCATGGAAACCCTGGGGCGAATCATTCG TTCATTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAGCTGTCAGCCTGCGCCGCGTCTATAGTTGCCCGATCCGCTCACCGGTTCGCCACCATGCAGCCAGTCACGCAAGCTTCCTACGAGCAACTGCAGGCAC GTGTCGCAGAGCTTGAAACCCTGCTGGCCCAGCGCGGTGACATTGCGCAGGCAAACAACAATCTGCTCGGCGAACTGGTCGATAACAGCTTGGCCAACGT ATTTGCAGCCGACCGCAAAATGCGCCTGTTGGCGATCAATCGCACAGCCCGCGAAACCTTCCAGCGGTGGCGCGGTTTTGTGCCGCAGATCGGCGATTAC ATCCCGCAGTTTCTGGCCAACCAACCGGACATCATGGGCCGCTTGGCCCCGGTGTGGCCGCGCCTGCTGGCCGGCGGAGCGTTCATCGACACCATCGCCC TCGGGCCACCTGACGCCCTGCGCCACTATGAAATCCGCTACCACCCGCTGCTCGACGCGCAGCAGCGCATCCAGGGCGGCTATATGTTCGCCTACGACAT
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| Amino Acid Sequence |
>GntR family transcriptional regulator
MKRYERFADDIAELIRSGVLGPGQRVPSVRYASQTHGVSPSTVFQAYYLLERRGLIRARPRSGYFVNAHAPRQFCEPQALQPVSESTDVDVSALVFSILD SIKDPNTVPFGSAFPSPELFPLQRLSRSLASASRAMDPRMVVTDLSPGNPQLRRQIALRYMVGGLMLPMEELLITNGALEALNLCLQAVTEPGDLVAIEA PAFYACLQVLERLKLKAVEIPVHPREGMDLSVLAQTLEKHPVKAVWCMTNFQNPVGASMPEAKKQALVELLARHQVPLIEDDVYAELYYAQQAPKPAKAF DTQGLVMHCGSFAKSLAPGYRIGWVAAGRFAQKIERLKLMTSLCASMPAQAAIADYLQHGGYDRHLRKLRYALEGQQANMLAAISRHFPAQTRVSQPSGG YFLWLELPEQMDALKLFHMALAQGISIAPGPIFSPTRRFGNCIRLNYGSPWHDGAEKAMETLGRIIRSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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