Pseudomonas sp. LAIL14HWK12:I7, D886_RS0108035
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I7 D886DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCAGATGAACTTCGTCGACAACCAGGTCAACCCGCGCACTGGCACCATCCGTGGCCGCGCCGTGTTCGACAACCGCGACGGCCAGTTCACCCCTGGCCT GTATGCCCGCCTGAAGCTGGTCGGCAGCGCCCAGTACGACGCCGTGCTGATCAACGACGAAGCCGTCGGCACCGACCTTGGCAAGAAGTTCGTGCTGGTG ATGGACAAGGACAACAAAGCCGCCTACCGCGCGGTAGAGCTGGGACCGAAGCTAGAAGGCCTGCGCATCGTGCGCAGCGGCCTGGCCAAGGACGACCGCA TCGTGGTCAGGGGCCTGCAGCGTGTGCGCCCAGGCTCCACGGTAACCCCGGAAGACACCCCGATGGCCAGCGAGCAGACCCTCGCCGCCCTCGCCCAACA GCGCCAGGCCCTGGAGGCCAGCAACCCGGCGCCGAAGGTAGCGGGCGCCACTGTAAAAGTCGCCAGCGCCCAAGCGCCACGCGGTTAAGGGACCACACCG
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| DNA Sequence for Gene |
>D886_RS0108035
ATGAACTTCTCGAAATTCTTCATCACCCGGCCGATCTTTGCGGCGGTACTGTCGCTGGTACTGCTGATCGCAGGGTCGATCTCGCTGTTCCAGTTACCGA TCAGCGAATACCCCGAGGTAGTGCCGCCTACAGTGGTGGTGCGTGCCAACTTCCCGGGCGCCAACCCCAAGGTGATCGGTGAAACGGTCGCCGCGCCGCT GGAGCAGGCCATCACCGGCGTGGAGAACATGCTGTACATGTCCTCCCAGTCCACCGCCGATGGCAAGCTGACACTGACCATCACCTTCGCCCTGGGCACT GACCTGGACAACGCGCAGGTGCAGGTCCAGAACCGTGTCACCCGTACCCAGCCCAAGCTGCCGGAGGAAGTGACGCGCATTGGTATCACCGTCGACAAGG CCTCGCCCGACCTGACCATGGTCGTGCACCTGACGTCGCCGGACAACCGCTACGACATGCTCTACCTGTCCAACTACGCCATCCTCAACATCAAGGACGA GTTGGCGCGCCTGGGCGGCGTGGGTGATGTGCAGCTGTTCGGCATGGGCGACTACTCGCTGCGCGTGTGGCTGGACCCGAACAAGACCGCTTCGCGCAAC CTGACCGCCAGCGACGTCGTTGCGGCCATCCGTGAGCAGAACCGCCAGGTTGCGGCCGGCCAATTGGGCGCCCCGCCCGCCCCCGGCTCCACCAGCTTCC AGCTGTCAATCAACACCCAAGGCCGGTTGGTCAATGAGGAAGAGTTCGAGAACATCATCATCCGTGCCGGGGCCGATGGCGAAATCACCCGCCTGAAAGA CATCGCCCGGGTCGAGCTGGGCTCCAGCCAGTACGCCCTGCGCTCGCTGCTGAACAACCAGCCGGCGGTGGCGATCCCGATCTTCCAGCGCCCAGGCTCC AATGCCATCGACATCTCCGACGAAGTGCGGGCGAAAATGGCCGAGCTGAAGAAGGACTTCCCTGAGGGGATGGACTACAGCATCGTCTATGACCCGACTG TGTTCGTCCGTGGTTCGATCGAAGCGGTAGTGCACACGCTGTTCGAAGCGCTGATCCTGGTCGTCCTGGTCGTGATCCTGTTCCTGCAGACCTGGCGCGC CTCGATCATTCCGCTGCTGGCCGTGCCGGTGTCGCTGATCGGTACCTTTGCCGTGATGCACCTGTTCGGCTTCTCACTCAATGCCTTGTCGCTGTTCGGG CTGGTATTGGCCATCGGTATCGTGGTGGACGACGCCATCGTCGTGGTGGAGAACGTCGAGCGTAATATCGGGCTTGGCCTGAAACCGCTGGAAGCCACGC AAAAGGCCATGAGCGAAGTGACCGGGCCGATCATCGCCACCGCCTTGGTGCTGTGCGCCGTGTTCGTACCTGCGGCGTTCATTTCCGGGCTTACCGGCCA GTTCTACAAGCAATTTGCCCTGACCATCGCCATCTCGACCGTGATCTCGGCATTCAACTCGCTGACCTTGTCGCCGGCCTTGGCGGCTGTGCTGCTCAAA GACCACCACGCGCCCAAGGACCGTTTCTCGCGGTTGCTGGAAAAGCTGCTGGGCAGTTGGCTGTTCGCGCCGTTCAACCGGTTCTTCGACCGTGCCAGCC ACAGCTATGTTGGCGGCGTGCGCCGGGTCATCCGCTCCAGCGGCATCGCCCTGTTCGTCTACGCTGGCCTGATGGGCCTGACCTACCTGGGCTTCTCGTC CACCCCGACCGGTTTCGTACCGGCCCAGGACAAGCAGTACCTGGTCGCCTTCGCCCAACTGCCAGACGCCGCCAGCCTCGACCGCACCGAGGCGGTGATC AAGCGCATGAGCGAAATCGCCCTGAAGCAACCGGGTGTTGCCGACTCGGTGGCCTTCCCAGGCCTGTCGATCAACGGTTTCACCAACAGCCCGAACAGCG GCATCGTGTTCACCCCGCTCAAGCCATTTGACGAGCGTAAAGACCCGAGCCAGTCGGCAGCCGCCATCGCCGCCGCGCTGAATGCCCAGTTCGCCGACAT CCAAGACGCCTACATCGCGATCTTCCCGCCTCCGCCGGTTCAAGGTTTGGGCACCATCGGCGGCTTCCGCCTGCAGATCGAGGACCGCGGCAACCTGGGC TACGAAGCGCTGTACAAAGAAACCCAGAACATCATCGCCAAGAGCCACAACGTGCCGGAGCTGGCTGGCCTGTTCACCAGCTACCAGGTCAACGTGCCAC AGGTCGATGCAGCCATCGACCGCGAAAAGGCCAAGACCCACGGCGTGGCGATCAATGACATCTTCGACACCCTGCAGGTCTACCTGGGCTCGCTGTACAC CAACGACTTCAACCGCTTTGGCCGTACCTACCAGGTCAACGTTCAGGCAGAACAGCAGTTCCGTCTCGACGCCGAGCAGATCGGCCAGTTGAAGGTGCGC AACAACCTGGGCGAGATGATCCCGCTGGCGACCTTCCTCAAGGTCAGCGACACCTCCGGGCCTGACCGCGTCATGCACTACAACGGCTTCATCACTGCCG AGATCAACGGCGCGGCGGCACCGGGCTACAGCTCTGGCCAGGCCGAGGCAGCCATTGAAAAATTGCTCAAGGAAGAGCTGCCCAACGGCATGACCTTCGA GTGGACCGACCTGACCTACCAGCAGATCCTCTCGGGCAACACCGCGCTGTTCGTCTTCCCGCTCTGCGTGCTGCTGGCCTTCCTGGTGCTGGCCGCCCAG TACGAAAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCGATGACCCTGCTGTCGGCCATTACCGGGGTGATCATCTCGGGTGGCGACAACAACA TCTTCACCCAGATCGGCTTGATCGTACTGGTGGGCCTGGCGTGCAAGAACGCGATCCTAATCGTCGAGTTCGCCAAGGATGAACAGGCCAAGGGCCTCGA CCCGCTGGCTGCAGTACTGGAAGCCTGCCGCCTGCGCCTGCGGCCGATCCTTATGACCTCGATCGCCTTCATCATGGGCGTGGTACCGCTGGTGTTCTCC TCCGGTGCCGGCTCGGAAATGCGCCACGCCATGGGTGTCGCGGTGTTCTCGGGGATGATCGGCGTCACTGTATTCGGGCTGTTCCTGACGCCTGTGTTCT TCTTCCTGATCCGCCGTTTCGTCGAACGCCGCCAGGCCCGCAAGGCCGAACGCGTTCAATCGCTGGAGAGCCACGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATATGCTCAAGCCCCTGACCCCGAGCCTGTTGGCCTTGGCCCTGGCGGCCTGTGCGGTGGGCCCGGACTACAAGACGCCGACCACCGAGCCTGCCCATTT CGACACTGAAATGCAGGCCAAGGCCTACGACCGCAGCCGCTTCGAAAGCATCTGGTGGAAGCAGTTCGACGACCCGGTGCTGAACCAACTGGTGCAGGCC TCGCTCGACGGCAACCGTGACCTTCGGGTGGCCTTCGCCCGGCTGAAGTCGGCCCGTGCGATCCGTGAGGACGCCTCGAACGACCAGTTGCCGGTGGTCA CCAGCCGTGCCAGCAGCGAAATCGGCAAGGGCCAGGTCCCCGGCCAGACTGAGCAGCGGGTTAACAGCGAACGCTACGACCTGGGCCTGGACATGGCTTG GGAGCTTGACCTGTTCGGCCGTATCCAGCGCCAGATCGAAGCCAGCGAAGCCCAGGAAGCCGCTGCCGCAGCCGACTTGCAGCAGTTGCAGGTCAGCCTG
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| Amino Acid Sequence |
>transporter
MNFSKFFITRPIFAAVLSLVLLIAGSISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGT DLDNAQVQVQNRVTRTQPKLPEEVTRIGITVDKASPDLTMVVHLTSPDNRYDMLYLSNYAILNIKDELARLGGVGDVQLFGMGDYSLRVWLDPNKTASRN LTASDVVAAIREQNRQVAAGQLGAPPAPGSTSFQLSINTQGRLVNEEEFENIIIRAGADGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS NAIDISDEVRAKMAELKKDFPEGMDYSIVYDPTVFVRGSIEAVVHTLFEALILVVLVVILFLQTWRASIIPLLAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGLKPLEATQKAMSEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLK DHHAPKDRFSRLLEKLLGSWLFAPFNRFFDRASHSYVGGVRRVIRSSGIALFVYAGLMGLTYLGFSSTPTGFVPAQDKQYLVAFAQLPDAASLDRTEAVI KRMSEIALKQPGVADSVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSQSAAAIAAALNAQFADIQDAYIAIFPPPPVQGLGTIGGFRLQIEDRGNLG YEALYKETQNIIAKSHNVPELAGLFTSYQVNVPQVDAAIDREKAKTHGVAINDIFDTLQVYLGSLYTNDFNRFGRTYQVNVQAEQQFRLDAEQIGQLKVR NNLGEMIPLATFLKVSDTSGPDRVMHYNGFITAEINGAAAPGYSSGQAEAAIEKLLKEELPNGMTFEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVIISGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDEQAKGLDPLAAVLEACRLRLRPILMTSIAFIMGVVPLVFS SGAGSEMRHAMGVAVFSGMIGVTVFGLFLTPVFFFLIRRFVERRQARKAERVQSLESHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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