Pseudomonas sp. LAIL14HWK12:I7, D886_RS0103010
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I7 D886DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGGCCATGGCCCGTGCCCACGAGGACCTGTCGAAAAAGTTTCGCTACAACCAGCGCCGCGAGTTGCGTTTGCTGGAAGAGGCGGGCGGGGTGGTGCGGC CGATCAGTGACTTTGACGCCGGCCAGATTGCCGCCATGTACCGTGACCTGTTCCAGCGTCGCTGGGGCTTCCCGGCCACCGGTGCCGAGCGCATTGACGA GGTGCTCGAGCGTTTGCGCGAGTTGTTGATTGGTTCGGTGCTGTTGCTCGACGACAAGCCCATCGCGATTCAGTTGGTGTATCGCGTCGAGGCGCCCGAG TGGATCAGCGTCGAGTACGTCAATGGCGGTGTCGACCCGGAAACCAAGGCGTTCAGCCCCGGGAGCGTGCTGAGCTTCCTGAATACCCAGGCGGCCTGGG AAGACGCCCGGGCGCGTAACAAACCCCTGCGGTTCTCGTTCGGTCGCGCCGACCGCGAGTACAAGGACCGCTGGTGCAATCCCGTGCCGGTGTTTCAGGC
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| DNA Sequence for Gene |
>D886_RS0103010
GTGAGCCGCAAGCAGCAGTTGCTCAAGCGCCACCGGCGCAACAAGCGCCTGGGCCTGCTTGCAGGCCTGCTCGTGCTGATCGGGCTGGGTGTATTCAGCT GGTGGTGGCTGCCGCTGTTGTTGCTGCCGCTGGTGTGGGCCGCCCACGAGGCCTGGTTCGCGGACCACCTGTTCTACGCGCCCACCGAGGACTATGCCTA CAACTTCGGTGAGCAGGCCCGCGCAGCCTCGGCCAGCCTGCAAAACGGCCTGTTGAAGGCCGACGCAGCGCTGCAAGGCGACGAAACCCTGGTCTTGGAG CTGCGGGTAAAGAGCACCTGGTTGGGGCGGTTTCTCGACCCGCGGGTGGAGCTGTTGGCGGATGAGCTGACGGACCGGCAGGCGTTCGAGCGCGGTGTCG ACGGGGTTCGCTTCCTCAACCTGACCGGCCTGGCCGCGCCGCTCCAGGCCGGTACGCTGCGTATGCGTGGCCGCCATTGCCGGCTGCAGGGCGAACCGCG CCTGTGGATAACCCCCAGCGTCGAGTTGCAGCGCCGTCGCGTGATGGTCATTGCGCCCCATGCCGATGACGCTGAGCTGGCAGCTTATGGCCTGTACAGC CAAGCCGACGAAACCTGGGTGGTCACCCTGACTGCCGGCGAAATCGAAGCCGAGCACTATCAACAGATGGGCTTGGGCAAAGCCGAGGCGGCGCGCCTCA AAGGCCGTTTGCGTGCCTGGGACAGCATTGCCGTGCCGCGCTGGGCGGGCGTGCCGGAATCGCGCTGTGTGCAGTTGGGCTACTTCTGCCTGCAACTGCC GGCCATGCAGGCCGCGCCGGATGTGCCGGCCGCTTCACGCGAAGCCGACATGGCCGATATCCGCCCGTTCCGCCAGTTCAACCCCTTCGCGCTGCCCGCC GACAGTGATGGTGCGCCGACCTGGCACAACCTGCTGGCTGACCTGCGCGCGTTGCTGGTCATGGCCAAGCCCGAAGTGCTGGTCATGCCGCACCCGCAAC TCGACCCGCACCCTGACCATATCTGTGCCCAGGCGGCCGTGCTGGAAGCCTTGCAGGGCCTGGAGTGGCAGCCGCAAACGCTGCTGTGCTATGCCAACCA CCTGCATGACAACGACCGCTGGCCAATGGGTGACAGCGGCGACGGTGTGGCCTTGCCGCCGCAACTGAGTGCCGACCAGCCGTGGGCGCCGTGCGCGCTG GTGCTGGGCCTGCCGACCCAACACGACAAGGCCATGGCCCTGGGCATGATGCACGACCTGCAGCCCCCGGCGCCGTTCAAGCGCCGCCTGCGCCGCCTGT TGCAACGCTGGCTGGCCGGGCGCCGGCCGTCGCCCTATGGCGAGAACGAATTCTTCCGCAAGGCCGTGCGCCGACATGAACTGTTCTGGCGGCGTGAGCT GTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCGCCCCCTGGTTGACCGCGATGGCGCTGAGCGCCCAAGGAACGCAATGAAAGTCTTATTTCTGGTGCAGAAGGAACAGCGGGCGATCCTCGACCGCC TGTACGATGGCGTCGCGGCCAACTGCGAATGTGACCTGCGCTGGCTGACCAGTGAAGACCAGCGTAACCTGCGCCGCTACTTCAAGCGTGAGGTGCAGGT GGAGCGTTATGACCGCATCGTGTTCTTCCTGCGCTTCAAGCAGGAGATCCGCCAGGTGGCGTTCATCCAGACGGTGCCTAACCTGGTCATCCTCGAGCAC GACGCCTACCAGAACTACATCCCCTGCAAGTACACCGGCAAGTTCAGCGCGCATTACCGCAAGCTGCCGTGGGCGCGGGTGATCAGTTCGGGCTACATGG TCAGTGAGCGCCTGCGCCAGGAGGGCTTTGACGCGGTATTCGTGCCCAAAGGCTACGATGAGCACCTGCTGACCGACCAAGGCCGTGAGCGCGACATCGA
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| Amino Acid Sequence |
>GlcNAc-PI de-N-acetylase
MSRKQQLLKRHRRNKRLGLLAGLLVLIGLGVFSWWWLPLLLLPLVWAAHEAWFADHLFYAPTEDYAYNFGEQARAASASLQNGLLKADAALQGDETLVLE LRVKSTWLGRFLDPRVELLADELTDRQAFERGVDGVRFLNLTGLAAPLQAGTLRMRGRHCRLQGEPRLWITPSVELQRRRVMVIAPHADDAELAAYGLYS QADETWVVTLTAGEIEAEHYQQMGLGKAEAARLKGRLRAWDSIAVPRWAGVPESRCVQLGYFCLQLPAMQAAPDVPAASREADMADIRPFRQFNPFALPA DSDGAPTWHNLLADLRALLVMAKPEVLVMPHPQLDPHPDHICAQAAVLEALQGLEWQPQTLLCYANHLHDNDRWPMGDSGDGVALPPQLSADQPWAPCAL VLGLPTQHDKAMALGMMHDLQPPAPFKRRLRRLLQRWLAGRRPSPYGENEFFRKAVRRHELFWRREL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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