Pseudomonas sp. LAIL14HWK12:I7, D886_RS0102550
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I7 D886DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCATGCGGCCGGGCTTCTCGACGGCGGCACCGCCTGCCCTCGGTGCCGAGTTGTTCGACTATCTTTTAGCGCAAGCGAAGGGCCAGCACGCCAAGGTG GCCAGTGGGCGCTTCGGTGCGGACATGCAGGTGCACCTGGTCAATGATGGCCCCGTAACATTTATGTTACAAATATGAGGTCAAAAACCCCTTGTTTGTA GGAGAACAAGGGGTTTTGTACGATAAATAGTTAGTCCAGCCTGATGCGTTGTCACGCGACCTGCTGGATAATCGCGCGCTGCATGGACCTGCGTTCGCAG GTTCGTTTCACTCTGACTCGAGCATTGTCTGGATCCGTTTGGGGAATCATTACGCCCTCACGGGGTCCGAACAGTGCTCGCCAACCCGGCATTAGTCGCT GGCCGTTGGTTTCATGATCTGTTTTCGGCGAGGGTTGCTCGTGATTGTTAGTCCCCATAAAGCATCAAGAATCCCCGGCATTCGGCTACGTAAGGCCCTG
|
|
| DNA Sequence for Gene |
>D886_RS0102550
ATGGCCAGTGTGGCACTGGTCGGCCTGATGAACGCGGGCCAGCTGTGGGCATTCAATCTTGACGATGTTGCAGCCAAGGCAAAGGATCTGGCCGGCCAGA AGTACGAAGCACCGAAGAGCAATCTGCCTGCGGTGTTCCGCGACATGAAGTTCGCCGACTACCAGAAGATTCACTTCCTGCAGGAAAAGGCCGAGTGGGC CAAGGACAAGACCCCCTTCAAGCTGTCGTTCTACCACCAGGGCATGCACTTCGACACCCCGGTGAAAATCAACGAAGTCACCGCCACCAAGGTCGAAGAA ATCAAGTACGACCCGAGCCGCTTCGAGTTCGGTGACGTGCCGCACGACCCGGAAACCACCAAGAACCTGGGCTATGCCGGTTTCCGCGTGCTTTACCCGA TCAACAAGGCCGACAAGCAGGACGAGATCATGACCCTGCTTGGCGCCAGCTATTTCCGCGTGGTCGGCAAGGGCCATGTGTACGGCCTGTCGGCCCGTGG CCTGGCCATCGACACCGCGCTGCCGTCGGGCGAGGAGTTCCCGCGGTTCACCGAGTTCTGGGTCGAGAAGCCGAAGGCTACCGACAAGCACCTGGTGATC TACGCCCTGCTGGACTCGCCGCGCTCCACCGGTGCCTACAAACTGACCCTGCGTCCGGGCAGCGACACCGTGGTCGACGTCAAGTCGCGGGTCTACCTGC GTGACCACGTCAGCCGCCTGGGCATCGCGCCACTCACCAGCATGTACCTGTTCGGCCCTAACCAGCCTTCCCGGGTCATGAACTACCGCCCGGCCTTGCA CGACTCCGAAGGCCTGTCGATCCATGCCGGCAACGGCGAGTGGCTGTGGCGCCCGCTGAACAACCCGAAACACCTGGCCGTGAGCAACTTCAGCGTCGAA AACCCGCGTGGTTTCGGCCTGATGCAGCGTCATCGCGACTTCAAGGACTATGAAGACCTCGATGACAACTACCAGAAGCGCCCAAGCGCCTGGATCGAGC CAAAAGGTGACTGGGGCAAGGGCACCGTCGACCTGGTCGAAATCCCGACTGCCGACGAGACCAACGACAACATCGTGGCCTTCTGGAGCCCAGAGACCTT GCCGGAGCCAGGCAAGCCGTTCGAGTACGACTACCGCCTGCACTGGACCATCCAGGAAGCGCAGTTCCAGGCCCAGGACCTGGCCTCGGTTACCCAGACC CTGCGTTCCACGGGCGACGTCAAACAGTCCAACCTGATCCGTCAGCCTGACGGCAGCGTGGCGTTCATCGTCGACTTCGCCGGTGCCAACCTGGCAGCCC TGCCGGAAGACGCCGCGGTACGTAGCCAGGTCAGCGTCGGCGACAACGCCGAGGTGGTCGAGAACAACCTGCGCTATAACCCAGAGAGCAAAGGCTGGCG CCTGACCCTGCGGTTGAAGGTCAAGGAAGCCAACAAATCGACGGAAATGCGCGCTGCGCTGGTGCGCGACGTGCCTGTCGAGCCTGCCAAGCCTGCTGCC AAGGACGCCAAGCAGGACAAGGCCGCTGCCAAGCATGCCAAGGCCGAGAAAGACGCCAAGGCCGAACAACCTGCCGCCGATGCGGCGTCCACCAACGGTA CCCCGGCCACCACCGAAAAAGTGCTGACCGAGACCTGGACCTATCAGTTGCCTGCCGATGAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTCAAGCGCAAGGCCGGTATCGCTTGGCGAATACCTGGCCCACCTCCCACTGAGCGATGAGCAGCGTGCGGAACTCGCCAGCTGCACCTCGTTCAGTGAG CTGCACCAACGCCTGGCGGCCAACCCGGCCGCCAACGCCGCCGAGGCCGTGCAGGCTTCGGTGGGCCCGCGGTTGACCGTGGGCAGCGCCGCCGAACTCG AAGACGCCGAAATGCTCGGCGTCGACGGCAGCGGCCGGTTGTGCCTGAAAATCGCACCGCCGATCAAGCGCACCCGTGTCGTGCCCGAGCCTTGGCGCAC CAACGTGCTGATCCGCATGTGGCGCCGCATGACCGGGCGCACCAACGCGCCGCAGCCAGAGCAGCGCGAGCTGCCCAAGGCCCGCTGGCGCACGGTCGGC TCGATCCGCCGTTATATCCTGCTGACCCTGATGATCGGCCAGACCATCGTTGCCGGTTGGTACATGAAGGGCATCCTGCCGTACCAGGGCTGGTCGTTCG
|
|
| Amino Acid Sequence |
>glucan biosynthesis protein G
MASVALVGLMNAGQLWAFNLDDVAAKAKDLAGQKYEAPKSNLPAVFRDMKFADYQKIHFLQEKAEWAKDKTPFKLSFYHQGMHFDTPVKINEVTATKVEE IKYDPSRFEFGDVPHDPETTKNLGYAGFRVLYPINKADKQDEIMTLLGASYFRVVGKGHVYGLSARGLAIDTALPSGEEFPRFTEFWVEKPKATDKHLVI YALLDSPRSTGAYKLTLRPGSDTVVDVKSRVYLRDHVSRLGIAPLTSMYLFGPNQPSRVMNYRPALHDSEGLSIHAGNGEWLWRPLNNPKHLAVSNFSVE NPRGFGLMQRHRDFKDYEDLDDNYQKRPSAWIEPKGDWGKGTVDLVEIPTADETNDNIVAFWSPETLPEPGKPFEYDYRLHWTIQEAQFQAQDLASVTQT LRSTGDVKQSNLIRQPDGSVAFIVDFAGANLAALPEDAAVRSQVSVGDNAEVVENNLRYNPESKGWRLTLRLKVKEANKSTEMRAALVRDVPVEPAKPAA KDAKQDKAAAKHAKAEKDAKAEQPAADAASTNGTPATTEKVLTETWTYQLPADE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|