Pseudomonas sp. 45MFCol3.1, G368_RS0126170
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 45MFCol3.1 G368DRAFT_scaffold00010.10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGAGGGTATCGATCTCGATGCCAGGGCCAAGGCCCAGTTGCAGGTCATGCTGGAGTTCATGAAGGCCGATCCGACGGTCAACCACATTGAACTCGACGG CCATTCCGACAACAGTGGCAACCGCCTGACCAACCGTGAACTGTCACGACGCCGGGCGCTGGCGGTGATGGATTTCTTCAAGGCCAATGGTGTGCAGGAA TCGCAGATCACCCTGCGTTTTCACGGTGAGCGCTATCCGCTGGCGCCCAACAACAATGCCGCCAACCGGGCGAAGAATCGCCGGGTTGCCGTACGCCTCG AACGGGTCGCACCGACCGAGAAGCCTGCGCCTCAAGCCACCGCCGCCGCGAGCAGCGCGACGACCTCCTGAACCTGCTGAATTCGTCGCTCGCTCGACAT AATCTGTCGCTTCGTCGTCATAAGCTGTCGCGCCTCTGTAAATTATCCTGCATGAGCGGTAGACTTGACAGCTTTCCGTAGAACCCCGTGGAGTGATGGC
|
|
| DNA Sequence for Gene |
>G368_RS0126170
ATGGCGGACGTAAACAAGGTCGTTCTGGCGTATTCCGGCGGCCTGGACACTTCGGTGATCCTCAAGTGGCTGCAGGATACATATAACTGTGAAGTAGTGA CCTTCACCGCTGACCTGGGTCAGGGCGAAGAGGTCGAACCGGCCCGCGCCAAGGCACAGGCCATGGGCGTAAAAGAAATCTATATCGACGATCTGCGCGA AGAATTCGTGCGTGATTTCGTATTCCCGATGTTCCGCGCCAACACCGTTTACGAAGGCGAGTACCTGCTGGGTACTTCCATCGCTCGTCCGTTGATCGCC AAACGCCTGATCGAAATCGCCAACGAAACCGGTGCTGACGCCATTTCCCACGGCGCGACCGGCAAGGGCAACGACCAGGTTCGTTTCGAACTGGGCGCCT ACGCCTTGAAGCCAGGTGTGAAAGTGATCGCTCCATGGCGCGAATGGGACCTGCTGTCCCGTGAGAAGCTGATGGACTACGCCGAGAAGCACGCGATTCC GATCGAGCGTCACGGCAAGAAAAAATCCCCGTACTCGATGGATGCCAACCTGCTGCACATCTCCTATGAAGGCGGCGTGCTGGAAGACACCTGGACCGAG CACGAAGAAGACATGTGGCGCTGGACCGTCTCCCCGGAGAACGCTCCCGACAAACCGCAGTACCTGGAACTGACCTACCGCAACGGCGACATCGTTGCAC TGGACGGCGTCGAAATGACCCCGGCCACCGTGCTGGCGACCTTGAACCGTATCGGTGGCGAACACGGTATCGGCCGTCTGGACATCGTCGAAAACCGCTA TGTGGGCATGAAGTCCCGTGGCTGCTACGAGACGCCTGGCGGCACCATCATGCTGCGCGCTCACCGTGCGATCGAATCGATCACCCTGGACCGCGAAGTG GCTCACCTCAAAGACGAGCTGATGCCTAAATACGCCAGCCTGATCTACACCGGTTACTGGTGGAGCCCAGAGCGTCTGATGCTGCAACAGATGATCGATG CTTCCCAGGCCCACGTGAATGGCGTAGTGCGCCTGAAACTGTACAAGGGCAACGTGATCGTCACCGGACGCAAATCCGACGAGTCGTTGTTCGACGCCAA CATCGCGACCTTCGAGGAAGATGGCGGCGCCTACAACCAGGCCGATGCGGCGGGCTTCATCAAGCTCAATGCCTTGCGCATGCGTATCGCGGCGAACAAA GGCCGCAAGCTGTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GACCTTTGATGCGGTAATGGAACTGTGGCCTTGTCGATGACAAGGCCACAGTTCTGAAAAAGGGCTGCTGCATATTACGTTTCGCTTTCTGCTTGTTTCT TCCAACCGTTCCTTCTGCTGCCTGCCTTTGATCTCACTTCAAGGGCTGCCTTGCTCTGTGCGATGGGTCAAAACCTAGCCCATGATCGTCACGTCATGTG AGCTCAAATTGTAAGAAATACAGAACGTTGCGTTGCTGCGTTTCTTTAGTTGTTTCCAGTGTTTGGGTGCGCTGTCCTTCAGCACTACCTCCGAATCGGC GCATGTGAGAAATACGATCACTTGTGCAGGATTATCCGGAGCGTGCTGGATACTCTCGATCAGGGCGCTGAACGCCATATTTTTGGTTATCCAGCGTGCA TCAATGATGTGCAGATCCTTTAGCGGTGCGGGCAGCTGCACATGGTGTTGGGCCGAGCGTTCAGGCGATACTCTGGAAGTGCTGTTTCCCGACTGATCAG
|
|
| Amino Acid Sequence |
>argininosuccinate synthase
MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIA KRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHAIPIERHGKKKSPYSMDANLLHISYEGGVLEDTWTE HEEDMWRWTVSPENAPDKPQYLELTYRNGDIVALDGVEMTPATVLATLNRIGGEHGIGRLDIVENRYVGMKSRGCYETPGGTIMLRAHRAIESITLDREV AHLKDELMPKYASLIYTGYWWSPERLMLQQMIDASQAHVNGVVRLKLYKGNVIVTGRKSDESLFDANIATFEEDGGAYNQADAAGFIKLNALRMRIAANK GRKLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|