Pseudomonas sp. 45MFCol3.1, G368_RS0124945
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 45MFCol3.1 G368DRAFT_scaffold00009.9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGGGTCAGCTCCAATTACGCGGCGGTAGCCTGCATCGACTTTCCGACCTGCCACGGCCAATGGCTGCCACCGGCTGATTTCGCCAACGGCTTTCACCTGA CCCAACACATCGGCCCGAATTATCTGGGCGGGCAGCTGGACAGCGATGCCCGCACCGCGATTCACCTGACTCACCGCATCGGCGCATTACTGGTCACCTT TGTTCTGCTCGGTCTGGCCTGGCAACTGAAGGTCGTCGGCATGACGCGCCTGGCCGTCATGGTGCTGATCGCCCTTGCCGCACAAATCACCCTGGGCATC AGCAACGTGGTGTTCCACTTGCCGCTGCCGGTGGCCGTCGCCCACAACGCCGGCGGTGCGGCGCTGTTGCTGACGATGGTGCTGGTCAATTATCACGCGC GAACCAGCCTGGTTCGGGTCAAGCATCAGCCCCCTCGGCGCTGGCGTCTACGCCTGCGTAAACACTCGGCCGGGCCCATAACAATAAAAGGAGAGATGCC
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| DNA Sequence for Gene |
>G368_RS0124945
ATGGCGACTCTGATCGGCGAACGTCACAGTCAGGCCATCTGGCGAGACTACCTGGAACTGACCAAGCCGAAAGTGGTGGTGCTGATGCTCATCACCTCGC TGGTCGGCATGTTCCTCGCGACCCGCGCCGGGGTGCCATGGACGGTACTGGTGTTCGGCAATCTGGGGATCGCCCTGTGTGCCGGCGGTGCCGCGGCGGT CAATCATGTGGTGGACCGGCGCATCGACGCGGTCATGGCCCGGACCCACAAACGGCCCCTGGCCGAAGGCCGGGTATCTCCAGCCGCCGCGCTGACCTTC GCCCTGATACTGGCGATGCTCGGCCAGGCCTTGCTACTGACTTTCACCAACCCGTTGACGGCGTGGCTGACCCTCGCCTCCTTGCTCGGTTATGCCGTGG TCTACACCGGTTTCCTGAAACGCGCGACGCCGCAGAACATCGTCATCGGCGGCCTCGCCGGAGCTGCCCCGCCACTGCTCGGCTGGACCGCCGCCACCGG TCATGTCGGCGCCGAACCATTGTTGCTGGTGCTGATCATCTTCGCCTGGACCCCACCGCACTTCTGGGCGCTGGCGATTCACCGCAAGGAGGAATACGCC AAGGCTGACATTCCGATGCTGCCGGTGACCCATGGCGAGCACTACACCAAAGTCCACATCCTGCTTTATACCTTTGCGTTGCTGGCCGTCAGCCTGATGC CCTACGTGATCCACATGAGCGGCGTGCTCTACCTGATGTGTGCCCTTTTACTGGGCGCCAGGTTTCTGCAATGGGCCGTGGTGCTGTACCGTGGCACTCG ACCGCACGCGGCGATCAACACGTTCAAGTACTCTATCTACTACTTGTTCCTGCTGTTTATCGCGCTGCTCGTAGACCACTACTTACTGTTGATCCTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTCGAACCCAGAAAACCGTCTTCATCCTCGTTGCCCTGATTGCGCTGATCCTGGGCCTGACCGTCAATAAAGTACTGACCGGGAAAAACCAGGGCGACCC GACGGCGCTGATCGATGCAGGGATCATCCTGCTGCCCCAAAGCCGCAATCTGCCGGACGTGAAGATGACCGATCAGGACGGCAAGCCAGTGGCGATCAAC GAACTGAAAGGCAAGTGGAGTTTGCTGTTCTTCGGCTACACCTTCTGCCCGGACATCTGCCCGACCACCCTCGCCCAGCTGCGGCAGATCAAGAGTGAAC TGCCGGCGGATGCGGTGAACAAGTTGCAGGTCATCCTGGTCAGCGTCGACCCGAACCGCGATACGCCCAAGCAACTCAAGCAGTACCTGGGCTACTTCGA TCCGCAATTCATCGGGCTGACCGCAGCCTCGGTCGAAGACCTTCAGAAAATGGCCAACGCGGTGAGCATTCCGTTCATTCCAGCGGACACCAGCAAGCCG
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| Amino Acid Sequence |
>protoheme IX farnesyltransferase
MATLIGERHSQAIWRDYLELTKPKVVVLMLITSLVGMFLATRAGVPWTVLVFGNLGIALCAGGAAAVNHVVDRRIDAVMARTHKRPLAEGRVSPAAALTF ALILAMLGQALLLTFTNPLTAWLTLASLLGYAVVYTGFLKRATPQNIVIGGLAGAAPPLLGWTAATGHVGAEPLLLVLIIFAWTPPHFWALAIHRKEEYA KADIPMLPVTHGEHYTKVHILLYTFALLAVSLMPYVIHMSGVLYLMCALLLGARFLQWAVVLYRGTRPHAAINTFKYSIYYLFLLFIALLVDHYLLLIL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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