Pseudomonas sp. 45MFCol3.1, G368_RS0121775 (proY)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 45MFCol3.1 G368DRAFT_scaffold00006.6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGCGCTGTCCCATCCGCATTCGGTGGACAGTCTGCCGACTTCCGCCAACCAGGAAGACCACGTGTCCATGGCGCCGGCTGCCGGCAAGCGTCTGTGG GAAATGGCCGAGAACACTCGCGGGATTCTCGCGGTGGAATGGTTGGCGGCGGCCCAAGGCCTGGATCTGCGCGACGGTCTGAAAACCTCGCCAAAACTGG AAAAAGCCCGCGCCATCCTGCGTGCCGAAGTGCCGTTCTATGAGAAGGATCGCTTCTTTGCGCCGGACATCAATGCGGCCAGTGAGTTGTTGGCCACGCG TTGCCTGAATGACCTGGTGACGGCGAAGTTGCTGCCTAGCCTGTAATAGCTCCTTCCCTGATGATCGTTCCCACGCTCTGCGTGGGAATGCAGCCCCGTG ACGCTCCGCGTCACTGGACGCGGAGCGTCCCCAGAGGCATTCCCACGCGGAGCGTGGGAACGATCATTTAGCGTCGAATAAGAATAATTAAGGACGAGAA
|
|
| DNA Sequence for Gene |
>G368_RS0121775
|proY
ATGCAACAGCCAGCAAAAGGTTTGAAACGCGGGCTCTCTGCCCGACATATTCGCTTCATGGCACTGGGGTCGGCGATCGGCACCGGGCTGTTTTACGGTT CTGCCTCGGCCATTCAAATGGCCGGCCCCGCGGTCCTGCTCGCTTACCTGATCGGTGGCGCGGCGGTGTTCATGGTCATGCGCGCCCTCGGCGAGATGGC GGTGCATAACCCGGTGGCCGGCTCATTCGGCCAGTACGCCAGCACCTATCTGGGGCCGATGGCGGGCTTTATCCTCGGTTGGACCTACGCGTTTGAAATG GTCATCGTCGGTATGGCCGACGTGACCGCATTCGGCATTTACATGGGTTTCTGGTTTCCGGAAGTCTCCCGCTGGATCTGGGTGCTGGGCATCGTTTCGG TGGTCGGCGGCTTGAACCTGTGCAACGTCAAAGTCTTCGGCGAAATGGAGTTCTGGTTGTCGCTGCTCAAGGTCGCGGCCATCGTCGCGATGATCCTCGG CGGCTTCGGCATCATGCTGTTCGGCATCAGCAATGCGCCCGGTGCCCAAGCGACCGATATCAGCAACCTCTGGACCCAGGGCGGCTTCATGCCCAATGGC GTGGGCGGCTTGATCGCCTCGTTTGCGGTGGTGATGTTTGCCTTTGGCGGTATTGAAATCATCGGCGTTACCGCCGGCGAAGCCAAAGACCCGCAGCATG TGCTGCCTCGCGCGATCAATGCTGTACCGTTGCGTATCTTGCTGTTCTACGTGCTGACGATGCTGGTGCTGATGTCGATCTTCCCGTGGCAGCAGATCGG CAGCCAAGGCAGCCCGTTCGTGCAGATTTTCGACAACCTGGGGATCAGCTCGGCGGCAACCATCCTCAACATCGTGGTGATCTCGGCGGCGGTGTCGGCC ATCAACAGTGACATCTTCGGCGCGGGCCGCATGATGTATGGCCTGGCTCAGCAAGGGCATGCACCGAAAGGCTTCGCCCGCTTGTCGCGCAATGGCGTGC CGTGGTTGACGGTGATAGTGATGAGCTGCGCGCTGCTGCTGGGTGTGTTGCTGAACTACCTGATCCCGGAAAACGTCTTTCTGCTGATCGCCTCCATCGC GACCTTTGCCACGGTATGGGTCTGGCTGATGATTCTGTTCACCCAGGTGGCCATGCGTCGCTCCATGAGTGCCGAGCAGGTCGCGCAATTGAAATTCCCG GTGCCGTTCTGGCCCTATGCGCCGATGGCGGCGATTGCCTTCATGCTGTTCATCTTCGGCGTGCTGGGTTATTTCCCGGATACCCAGGCGGCGTTGATCG TCGGCGTGGTCTGGATTGTGTTGCTGGTGCTGGCCTACCTGACGTGGGTCAAACCGGCGGCAGGCAAGGCGGTACCGGTGGAACAGGAACCCATTTTTTC TCATCGATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCTAACGGAGGCCAAGGATGAAAACGCTCTGGCAACACTGTCACGTCGCAACCATGGCGCAAGGCGTCTACTCGATCATCGAGGATGCGGCCATCGTGAC GTCCGGTGCGCACATTGAGTGGATCGGCCCACGCGCCGAACTGCCGGCCGGCGAGTATCCGGCCGTCAATGACTTGAGCGGGGCCTGGGTCACCCCGGGC CTGATCGACTGCCACACCCACACGGTGTTCGGCGGCAACCGCAGCGGCGAATTCGAGCAGCGCCTGCAAGGCGTCAGCTACGCGGAAATCGCCGCTGCCG GCGGCGGCATTGCCAGCACCGTGCGCGCCACCCGCGCCGCCAGCGAAGACGAGCTGTTCGCCAGCGCCGCCAAGCGTCTGAAAAGCCTGATGCGTGATGG CGTGACCACCGTCGAAATGAAATCCGGCTACGGCCTGGACCTAGCCAGCGAACGCAAGATCCTGCGGGTGATCCGTCGTCTCGGCGCCGAGCTACCCGTC
|
|
| Amino Acid Sequence |
>permease
MQQPAKGLKRGLSARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIGGAAVFMVMRALGEMAVHNPVAGSFGQYASTYLGPMAGFILGWTYAFEM VIVGMADVTAFGIYMGFWFPEVSRWIWVLGIVSVVGGLNLCNVKVFGEMEFWLSLLKVAAIVAMILGGFGIMLFGISNAPGAQATDISNLWTQGGFMPNG VGGLIASFAVVMFAFGGIEIIGVTAGEAKDPQHVLPRAINAVPLRILLFYVLTMLVLMSIFPWQQIGSQGSPFVQIFDNLGISSAATILNIVVISAAVSA INSDIFGAGRMMYGLAQQGHAPKGFARLSRNGVPWLTVIVMSCALLLGVLLNYLIPENVFLLIASIATFATVWVWLMILFTQVAMRRSMSAEQVAQLKFP VPFWPYAPMAAIAFMLFIFGVLGYFPDTQAALIVGVVWIVLLVLAYLTWVKPAAGKAVPVEQEPIFSHR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|