Pseudomonas sp. 45MFCol3.1, G368_RS0121635
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 45MFCol3.1 G368DRAFT_scaffold00006.6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCACGGCAAACCTATCCTGCAATTTGGCAAGATCGGCGTAGGCCTGAGCAAGGTCGAACCAGCCGGTCAGTACGCACTGAAATTGACCTTCGACGACG GCCACGACAGCGGCCTGTTCACCTGGGAATATCTGTACCAGTTGGCGGTGCGCCAAGAGGATCTGTGGAACGATTATCTTGCCGAACTCAAAGCGGCTGG AAAGACCCGTGATCCGAACGAGTCAGTCGTCAAGCTGATGCTCTAGGTCAGGCCTCGAGGTATTTAGAGGGCATTTTCTAATTCCATCTGTTTGAATGCT TGGCTGCCGGGTCAACGATTGGCCCGCTTGCGAAAAAAATTAAACTCGGGTAACCAATGGAGCTGGCAAGTTCCGTGCAGTGCTCTCTGAACTGAAAAGC AGCTATGCAATCAACGGTCACCCGAGCAGTAGTACCTGGCGCATTGTGTGACTACACAGCTGGGCTCAGGTACTCGCCTCAGGACAATGGAGCGTCGTAG
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| DNA Sequence for Gene |
>G368_RS0121635
ATGAGTAACAAGCAAAACGATGACCTGAAATTCCAGGCTTCAGAAAATACCTTGGGACTGAATCCTGTTGTTGGGCTGCGTAGAAAGGATCTACTGGGCT CTGCCCGAATGGTGCTGACCCAGGCCATCAGACAACCCATCCACAGTGCCAGGCACGTCGCCCATTTCGGCATCGAACTCAAGAACGTGCTGTTCGGAAA ATCCGAGCTTCAACCGCAAAGCGACGACCGCCGTTTCCTCGACCCGGCCTGGAGCCAGAACCCTCTCTACAAACGTTATTTGCAAACTTATCTGGCGTGG CGCAAGGAGCTCCACACCTGGATCGATAAGAGCAATCTCTCGCCCAAGGACGTCGCTCGCGGGCATTTCGTGATCAACCTCATGACCGAAGCCATGGCCC CGACCAACACGGCAGCCAACCCGGCGGCGGTAAAACGCTTCTTCGAAACCGGCGGCAAAAGCCTGCTTGACGGTCTCTCCCATCTGGCCAAAGATCTGAT CCACAACGGCGGGATGCCGAGCCAGGTCAACATGGGCGCGTTTGAAGTCGGCAAGAGTCTGGGCGTGACCGAAGGCGCGGTAGTCTTTCGCAACGACGTG CTGGAGCTGATCCAGTACAAGCCGATCACCGAGCAAGTGCATGAACGCCCACTGCTGGTGGTGCCGCCGCAAATCAACAAGTTCTATGTTTTCGACCTCA GCCCGGACAAGAGCCTGGCGCGCTTCTGCCTGCGCAACAACGTGCAGACGTTCATCGTCAGCTGGCGCAACCCGACCAAGGAGCAACGCGAGTGGGGTCT GTCGACCTACATCGAAGCACTCAAGGAAGCAGTCGATGTAGTCACCGCGATCACCGGCAGCAAAGACGTGAACATGCTCGGCGCCTGCTCCGGTGGTATC ACCTGCACTGCCCTGCTGGGTCACTACGCAGCGATCGGCGAGAAGAAAGTGAACGCCCTGACTCTGCTGGTCAGCGTGCTCGACACCACCCTCGACAGCG ACGTGGCCCTGTTCGTCGACGAGCAGACCCTCGAAGCCGCCAAGCGCCATTCCTACCAGGCCGGTGTGCTGGAAGGTCGCGACATGGCGAAAGTCTTCGC CTGGATGCGCCCCAACGACTTGATCTGGAACTACTGGGTCAACAACTACCTGTTAGGCAACGAGCCACCGGTATTCGACATTCTGTTCTGGAACAACGAC ACCACTCGCCTGCCGGCCGCTTTCCACGGCGACCTGATCGAGATGTTCAAAAACAACCCACTGATCCGCCCCAACGCACTGGAAGTGTGCGGCACGCCGA TCGACCTCAAACAGGTCGATGCCGACATCTTTTCCCTGGCCGGCACCAACGATCACATCACCCCGTGGAAGTCCTGCTACAAGTCGGCACAACTGTTCGG TGGCAAGGTCGAGTTCGTGCTGTCCAGCAGCGGGCATATCCAGAGCATTCTGAACCCGCCGGGCAATCCGAAAGCACGCTACATGACCAGCACCGACATG CCGGTCAAGGCCGAGGACTGGATGGAAAACTCCACCAAGCACACCGACTCCTGGTGGCTGCATTGGCAGGCGTGGCAGGCCGAACGCTCGGGCAAACTGA AGAAGTCCCCCGCCAACCTTGGCAACAAGGCCTATCCCGCGGGCGAGGCGTCGCCAGGCACGTATGTGCACGAACGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTTCAAACAACTCGCAGTCCGCGGCACTGGGAAGTGCCGCGATTGTCATTAATCAGCCTCGAGGCCAGCCTCGAATATTCTGCGACGGCCCGGGATGGC CCAATCAGCGTTTAAAACCTACAGGGCTTCGTGCATGCCGCAACCGTTCATATTCCGTACCGTCAACCTGGATGGGCAGACCCTCCGCACCGCGGTACGC CCCGGCAAGCCTCACTTGACGCCCTTGCTGGTTTTCAATGGCATCGGTGCCAACCTGGAGCTGATATTTCCGTTCGTCCAGGCGCTGGATCCGGACCTGG AAGTCATCGCCTTCGACGTACCCGGTGTCGGCGGCTCATCGACGCCCAGCCGGCCGTATCGCTTTTCGGGCCTGGCGAAACTGACGGCGCGAATGCTCGA CTATCTCGATTACGGGCAGGTCAATGTGATCGGCGTGTCATGGGGGGGCGCCCTGGCGCAGCAATTTGCCTATGACTATCCCGAGCGCTGCAAGAAGCTG
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| Amino Acid Sequence |
>poly(R)-hydroxyalkanoic acid synthase
MSNKQNDDLKFQASENTLGLNPVVGLRRKDLLGSARMVLTQAIRQPIHSARHVAHFGIELKNVLFGKSELQPQSDDRRFLDPAWSQNPLYKRYLQTYLAW RKELHTWIDKSNLSPKDVARGHFVINLMTEAMAPTNTAANPAAVKRFFETGGKSLLDGLSHLAKDLIHNGGMPSQVNMGAFEVGKSLGVTEGAVVFRNDV LELIQYKPITEQVHERPLLVVPPQINKFYVFDLSPDKSLARFCLRNNVQTFIVSWRNPTKEQREWGLSTYIEALKEAVDVVTAITGSKDVNMLGACSGGI TCTALLGHYAAIGEKKVNALTLLVSVLDTTLDSDVALFVDEQTLEAAKRHSYQAGVLEGRDMAKVFAWMRPNDLIWNYWVNNYLLGNEPPVFDILFWNND TTRLPAAFHGDLIEMFKNNPLIRPNALEVCGTPIDLKQVDADIFSLAGTNDHITPWKSCYKSAQLFGGKVEFVLSSSGHIQSILNPPGNPKARYMTSTDM PVKAEDWMENSTKHTDSWWLHWQAWQAERSGKLKKSPANLGNKAYPAGEASPGTYVHER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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