Strain | Pseudomonas sp. 45MFCol3.1 G368DRAFT_scaffold00004.4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGTTTGTCCGGTGCGACGATTCTCGGCGATGGTCGGGTGGTGCTGATTCTCGACTTGCTGGCACCGATCCGCGCGATGCAAGCGCAGGTGCCGCAACGA CCGGTGACGCAGGACGTAGAGCCCGAGGCGCAACGGCCGTTGCTGGTGCTGGTGGTCGACGATTCGGTCACCGTGCGCAAGGTCACCAGCCGTCTGCTGG AGCGCCACGGCATGAACGTACTGACCGCCAAGGACGGTGTCGACGCCATGCTGCTGCTCGAAGAGCACATGCCCGACCTGATGCTGCTGGACATCGAAAT GCCACGCATGGACGGCTTCGAAGTGGCGACCCAGGTGCGCGCCGATGAACGCTTGCAACATCTGCCGATCATCATGATCACCTCCCGCACCGGTCAAAAA CACCGCGACCGCGCCATGGCCATCGGCGTCAACGACTACCTCGGCAAGCCTTATCAGGAATCGGTGCTGCTCGACAGCATCGCCCGCTGGAGCAAAATCC
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DNA Sequence for Gene |
>G368_RS0117490
ATGCATGAACACCGCTCCAGCAACCTCACGGGTTTGCTGCTGCCTTTGGCCGACCGCAACCTGATCCTGCCCAACGTCGCCGTCGCTGAACTCATCGACT ATCAGCCGGGGGCTTTCGATCTCGATACACCGCCGTGGTACCTGGGGCGGGTGACCTGGCGCGAACGGCAGATTCCACTGCTCAGTTTCGAGTCGGCGTG TGGCAACAAAGTGGTGATTGGCGAGCGAGCACGGATCGTCATCCTCAACGCCCTCGGCGGGCGGCCTGAGCTGAAGTTCATTGCGCTGCTGGTGCAGGGA ATTCCACGTTCTTACAAACTCGACAGTCAGTTGAGCTATGTCGACGTGCCGTTGTGTTCGCTGGAAAAGGCGGCGGTGCAGGTGGGGGAGCAAGTGGCCA AGGTGCCTGACTTGCTCGCGCTGGAGGAGTTGCTTGTAAGTGCGGGTCTGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGACCCTGTGGCGAGGGAGCTTGCTCCCGCTGGGTCGCGAAGCGGCCCCAAAACCTGTCATCGATGTGTGTCAGGTACACCAAGAACAATGGTTTTAC GACTGCTTCGCAGCCGAACGGGAGCAAGCTCCCTCGCCACAGGGGGGTGTGCGTTAAACCCCGGCCCGAGCCTTCATCTGCAACGACTCATGATGATCCA GCACCCGCTCCACCAACAACTGCACGCCATCTGCCAAACGGCTGAGCGCCAAGGCTACAGAGCGACGTGAGCCTTCCACATCGTCCGCGAGGTCAGCAGC AATGGCGCTGATAGACAGCAGGTCTTCGGATGCGTTGGCCAGAAGGGCTTCGGTGTCGATGTCGGGGGAGACGCTGAAGAGGCGGAGTTTGCGGCGTTTG GCCGGTTTTTCGTGGGGTGACGGGAAGTAATGGGAGAAGGCGCGGTCGGCGGCTTCCTTGAGTTTCTCGGCTTCGAGGGAGGCTTGGGAATCGGTGCCGG
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Amino Acid Sequence |
>chemotaxis protein
MHEHRSSNLTGLLLPLADRNLILPNVAVAELIDYQPGAFDLDTPPWYLGRVTWRERQIPLLSFESACGNKVVIGERARIVILNALGGRPELKFIALLVQG IPRSYKLDSQLSYVDVPLCSLEKAAVQVGEQVAKVPDLLALEELLVSAGLV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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