Strain | Pseudomonas sp. 45MFCol3.1 G368DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGCGGCCGGTTCCGGAGTCGCCACAAAGTCACGCATGCGGTTGTAATCGTCCAGGGTCTTGTTCATGGCTTACCGGGTGCTCGCTGGCGGACGCTGAAT CGGCACGTCTCTACATCAGCAGAGCGACAGGTCCGGAAAAAAATTCCATCGCCACTGGAATTGCCCGGACAGACGGCTGGGTCTATCGGGATGATCGCTC ATAGCCTTGATGCGCAACTTCTTGCGCAGTTATTCGTCCCAAAAACACCTCGACAACGCTGAACGCCAGGTGGATCAAGCCCTCCAGCCGAGTGCGCAAC TTCTTGCGCACCACTGCGCAAGAAGTTGCGCACTTTTTCAGGTAATCGCTGCCGAAAAACCTCTCCACGTTTAAAAAATATCCTCAACCACCTGATTTAT ATGACAAAAAATATTTCTGGCACGCTCCTTGATAACAGTCAGGCACCCACCGGGCGATACCGCCTCCCGGGCACCCTCACTTTTAGCAAGGAGCACATCC
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DNA Sequence for Gene |
>G368_RS0106730
ATGGCTACACCAGCGTACATGTCCGTTACTGGCGAGAAACAAGGCCTGATCACTGCCGGCGCATTCACCGCCGACTCCGTTGGCAACACCTACCAGGAAG GCCACGAAGACCAGGTCATGGTTCAGGCTTTCAGCCACGACGTGATCATCCCGCGTGACCCACAGTCCGGCCAACCGACCGGTCAGCGTGTACACAAGCC AGTCGTGATCACCAAGGTATACGACAAGTCTTCGCCACTGCTGCAAGCGGCGCTGACCTCCGGCGAGCGCATGAGCGAAATCGTTATCCAGTGGTACCGC ACCTCTGCTCAAGGTACCCAAGAGCACTACTACACCACCAAACTGGAAGACGCGATCATCGTCGCCATCAACAACAAAATGCACAACTGCCAGGATCCGT CGAACTCGCACTTCACGCACCTGGAAGAAGTGCAATTCACCTACCGCAAAATCACCTGGACCCACGAAGTATCCGGTACTTCGGGTTCCGATGACTGGCG TGTTCCAGTCGCTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGCGGCTGACGGTTCCAAACATCGGCCAGCTCTGCTGGTCGATGTCATTTGCGCCTTCCAGGAATTTTCGCGTCCGCAAGCGCCCGTTTGGGTGTAGGC GTGCGCCGCAGCACTGCACGAGGAACAAGGGATGTTCGCGCCGGCCAATCAGACTCACTTTGCCCTGACTGTCGAAGGTCTGGAAAACGATCTCCAGGTC CTTGCCCTGCAAGGTCGGGAAGCCATCAGCCAGCCTTTTGTGTTTGAGGTGGAACTGGTCAGTGAGCAGCCGTCCCTGGACCTCGAAACGCTATTGCACA AACCGGCCTTTTTGCAGCTCTCGCCTGACGGCAGCGGCATTCATGGCCAGATCTACCGCGCCGCCCAGGGCGATTCGGGCAAACGCCTGACCCGCTACGC CGTGACCTTGCGCCCGCAGCTGTCCTACCTGGCGCACCGCATCAACCAACGCATCTTCCAGAACCTCACTGTGCCGAAAATCATCGGGATGGTCCTCGAA
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Amino Acid Sequence |
>hypothetical protein
MATPAYMSVTGEKQGLITAGAFTADSVGNTYQEGHEDQVMVQAFSHDVIIPRDPQSGQPTGQRVHKPVVITKVYDKSSPLLQAALTSGERMSEIVIQWYR TSAQGTQEHYYTTKLEDAIIVAINNKMHNCQDPSNSHFTHLEEVQFTYRKITWTHEVSGTSGSDDWRVPVA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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