Pseudomonas sp. 45MFCol3.1, G368_RS0105040
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 45MFCol3.1 G368DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGCGTTCTACGGCATGTCGACCTTCGAAGGCCCGATGATGGCCATCAAGACCGTCAACTCGCTCTCGCACTACACCGACTGGACCATCGGCCACGTAC ACGCCGGCGCCTTGGGCTGGGTAGCGATGATCTCGATCGGCGCCATCTACCACATGATCCCGAAACTGTTCGGCCGTGCACAAATGCACAGCACCGGCCT GATCAACGCGCACTTCTGGCTCGCGACCATCGGTACCGTGCTGTACATCGCGTCGATGTGGGTCAACGGCATCACCCAGGGCCTGATGTGGCGTGCAATC AACGACGACGGCACCCTCACCTACTCGTTCGTGGAAGCGCTGCAAGCCAGCCACCCTGGTTTCATCGTTCGTGCCCTGGGCGGCGCGTTCTTTGCCAGCG GCATGCTGTTGATGGCCTACAACGTGTTCCGTACCGTTCGTGCCTCGGACCCGGCTGAAGCTGAAGCCGCCGCCAAGATTGCTGTAGTTGGAGCTCACTG
|
|
| DNA Sequence for Gene |
>G368_RS0105040
ATGAAGCATGAAGCAGTCGAGAAGAATATTGGCCTGCTGGCCTTCTTCATGGTTATCGCCGTCAGCATCGGCGGCCTGACCCAGATCGTTCCGCTGTTTT TCCAGGACGTTACCAACAAGCCGGTCGAGGGCATGAAGCCTCGTACCGCCCTTGAACTGGAAGGCCGCGACATCTACATCGCCAACGGTTGTGTCGGCTG CCACTCGCAGATGATCCGCCCGTTCCGTGCTGAAACCGAACGCTACGGCCACTACTCGGTCGCCGGTGAAAGCGTCTGGGACCACCCGTTCCTGTGGGGT TCCAAGCGTACCGGTCCGGACCTGGCCCGTGTCGGCGGTCGTTACTCCGATGACTGGCAGCGTGCGCACTTGTACAACCCGCGCAACGTGGTGCCCGAGT CGAAAATGCCGGCTTACCCGTTCCTCGTGGAAAACAAGCTCGACGGCAAAGACACCGCCAAGAAAATGGAAGTCTTGCGCACGCTCGGCGTCCCTTACAC CGACGAAGACATCGCCGGCGCCAAGGATGCTGTGAAGGGCAAAACCGAAATGGACGCGCTGGTGGCCTATCTGCAAGGCCTGGGCACCATCATCAAAAGC AAACGGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTTAGATGGATATCGGGATGATTCGTGGCCTGGGCACCGTTGTTGTGATGGTGGCCTTCATCGGTCTGGCGTTGTGGGTATTCAGCCCCAAGCGCAAGTC GGAGTTTGAAGACGCGACCTTGCTGCCTTTCGCGGATGATCCCGAAGCCATCAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGAATGACTACGTTCT GGAGTCTGTACGTCACAGTCCTCAGTCTCGGCACCATCTTCGCCCTGACCTGGCTGCTGCTGTCCACCCGCAAGGGCCAGCGCGCCGAGCAGACCGACGA GACGGTCGGCCACTCCTTCGACGGGATCGAGGAGTACGACAACCCACTGCCGAAATGGTGGTTCATGCTGTTCGTGGGCACCATCATCTTCGCCCTTGGC TATCTGGTCCTGTACCCGGGCCTGGGTAACTGGAAAGGCCTGTTGCCAGGTTACAACTACCTGGATAACGAGAAGCAGACCGCGTTCGCCAACGGCCAGA
|
|
| Amino Acid Sequence |
>peptidase S41
MKHEAVEKNIGLLAFFMVIAVSIGGLTQIVPLFFQDVTNKPVEGMKPRTALELEGRDIYIANGCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWG SKRTGPDLARVGGRYSDDWQRAHLYNPRNVVPESKMPAYPFLVENKLDGKDTAKKMEVLRTLGVPYTDEDIAGAKDAVKGKTEMDALVAYLQGLGTIIKS KR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|