Pseudomonas sp. 45MFCol3.1, G368_RS0103135
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 45MFCol3.1 G368DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAACAGCTGAACGCGGTCAATCACTTCTTCAATCAGCAACTGAGTTTTCAGGATGACACGCGCATCTGGCATCAGACCGATTACTGGGCCACGCCCGTGG AATCCTTGATCAAAGCCGCAGGCGACTGCGAAGACTACGCCCTGGCGAAATATTTCAGCCTGCGTCATCTCGGGATTCCCAGCGAAAAACTGCGCATCAC CTACGTCAAGGCCCTGACCCAGAACCAGGCGCACATGGTGTTGACCTTCTACAGCAGCCCCACGGCCGATCCGCTGGTGCTGGACAACCTGATCGACGAG ATCCGCCCCGCCTCCCAACGCAAAGACCTGCTGCCGGTGTACGCCTTCAACGCCGAAGGCCTGTACTTGCCGGGGGCCAATGGCGGTAAACGCAGCAGCG ACTCGAAAAAACTGTCGCGCTGGCAAGACGTATTGAAAAAGATGCAAATCGAAGGGTTCGCCGTGGGCGAAGGCTAGCCGCCACTGCAAGGAGTGTTTTC
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| DNA Sequence for Gene |
>G368_RS0103135
ATGTCACTGCGCAAACAGTTGTTCCTCGCCATTTGCCTGTTCTTGCTGGTGGCCTTCAGCGGCAGTTTTTTTGTCAGCCTGGAAAGCTCCCGTGAACAGA TGCTCAGTCAGTTGCGCTCCCACGCCCAGGATGCTGCGACGGCGCTGGGCCTGTCGTTGACCGCGCAGATCGACGACCCGGCAATGATCGAATTGATGGT CAGCTCGATATTCGACAGCGGCTATTTCAGCAGCATCCGGGTCGTCAGTATTGTGGATGAACGGGTGTTGGTGGAACGCAGCATATCGACGCAAATCGAG GGTGTTCCGGACTGGTTCGTCAGCCTGGTGAACCTGCACCCACAGGGTGGCGATGCGCTGGTCACGCGTGGCTGGGACCAGGCAGCCCGGGTCGAAGTGC TGAGCAACCCGCAGTTCGCCCTGGCCAAACTCTGGGACAGCACCCTTGGCAGCCTGATCTGGCTGCTGATTTGCGGACTGCTCAGCGCCGTGTTTGGTGG CTGGCTGTTGCGCCGGCAGCTGCGGCCGCTCGACAACATGGTCAAACAGGCGGAAGCCATCAGCAAACGCGAGTTCCGCAGCTTGCCGAAACTGCCGCGC ACACCGGAGCTCAAACGCGTGGTGCTGGCCATGAACCAGATGGTCGAAAAACTCAAGGCGCTGTTCGCCGAAGAGGCCGCGCGCAGCGAAAAACTACGCT CCGAATCCTATCAGGACAACCTCACGGGCCTGGCCAACCGGCGCTTGCTGGATGAACAACTGGCCGACCAATTACTGGATTCCGAGCAAAGCCGCGACGG TCATTTGCTGATGCTGCGGATCAACGACCTGATCGGTCTCAATCAACGCCTGGGTGGCCAGCGCACCGATGCCCTGATCAGCGCCGTCGGCGAATTGCTC AAGCGCCTGACGCAACCCGCGGAACGTCGCGCCTGGCTCGCGGCGCGCAATCGCGGCGGCGAATTCAGTTTGCTGACACCGGGCCTGGACAGTAAGGATG CCGCGCGCCTGGCCTCCGAAATCAGCGCCACCCTGGAAAACCTGCGCCTGACCGGCGCCAGCGACTGCATGCCGGTGGCGCATCTGGGCATCGTCGCCTA CCACCCCGGCGAACCGGCAAATGATGTGCTGCTGCGCCTGGATCAAGCGCTGACCCAGGCCCGGCAACATCCCGAGCGGCCATGGATATACCAGGCCCAG GTCGATACTGCGCCGAATCACTCGCAGCATGATTGGCGCAACTGGATCGACGACGCGCTGACCGAAGGCAAGATGCAGTTGTATTTTCAACCGGTGGTGC AATGCGCCGACACCAGCCAGGTGCTGCACCACAAAGTCCTCGCGCGCCTGCTTGATCCGCAAGGCGAGGCGATTGCCGCCGGGCATTTCCTGCCGTGGAT CGAACGTCTCGGCTGGTCGGCGCGGTTCGACCTGGCCATGCTCGAAACCACCCTCGAATACCTCGCCGCCAACCGCTGGCCGCTCGCGCTGAGCCTGTCC GGCAGCACCCTGCGCGATCAAACCCAGCTGAAACTGATCTGCGACATACTCCAATCATTGCCGGAACTGGCGCCTCTGCTGACCCTGGAAATCGACGAAC GCCAACTGCCGCCCCCCGAAGAACTGCAACGCCTGAGCCACAGCCTGCTCAAAACCGGTTACCGCATCGGTCTACAGCATTTCGGCGGCAGCTTCAGCCA GATCGGCAACCTGACTCAACTGGGGTTGGCTTACTTGAAAATCGATGCTGCCTACATTCGGGGTATCGATGAGCAGAGTGATAAGCGGTTGTTCATCGAG GCGATTTTTCGCGCGACCAACAGCATTGATTTGCCGTTGATTGCGGAGATGGTGGAGACGCAGGCGGAATTGGAGGTGATTCGGGAGTTGGGGTTGTTTG GGGTGATGGGGCGGTTGATTGGGCCGCCGGAGCCGATGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGATTCGACCGTTCATCTTAAACCGTGCACTACCTGTCAGATCTGACAGTAGCCAGTCTTCCCTACCTGGTGTGTGATAAGCCCGTGTCCCGAGAGGAC TCAGGGTTTGTCACCTTCCAGGAGAACATGATGGATATCCAGTCCGCCGAGTTGAACAAATTGTTCGTGCTGTTCCCCGTGATCATCCCGGGCTGGGTCA CCCCGGTGAAACCGGACGGCAGCGCCCACGGCGGTATCCCCAAAGCCCTTTATGACGACCAGGCCCGGGGCCTTGAATGCCTGGTTGATTACTGGGAGGA GCTGCAGCTGCGCTCCTTGATCATGGCGGTCGATGATCGCGTGGATTTGTATTGCAACGGCAATCTCGTCCCAGGAGCAGGCCAGACCGTCAAACCGGGG GAGGAACAACTGCGTCTACGTCTGTACCTGCCACATGGTTACCTGAACCAGGGCGTCAATACGTTGCATTACGTGGTCACCCGTGTCAGCGGGAACAGTG
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| Amino Acid Sequence |
>DeoR family transcriptional regulator
MSLRKQLFLAICLFLLVAFSGSFFVSLESSREQMLSQLRSHAQDAATALGLSLTAQIDDPAMIELMVSSIFDSGYFSSIRVVSIVDERVLVERSISTQIE GVPDWFVSLVNLHPQGGDALVTRGWDQAARVEVLSNPQFALAKLWDSTLGSLIWLLICGLLSAVFGGWLLRRQLRPLDNMVKQAEAISKREFRSLPKLPR TPELKRVVLAMNQMVEKLKALFAEEAARSEKLRSESYQDNLTGLANRRLLDEQLADQLLDSEQSRDGHLLMLRINDLIGLNQRLGGQRTDALISAVGELL KRLTQPAERRAWLAARNRGGEFSLLTPGLDSKDAARLASEISATLENLRLTGASDCMPVAHLGIVAYHPGEPANDVLLRLDQALTQARQHPERPWIYQAQ VDTAPNHSQHDWRNWIDDALTEGKMQLYFQPVVQCADTSQVLHHKVLARLLDPQGEAIAAGHFLPWIERLGWSARFDLAMLETTLEYLAANRWPLALSLS GSTLRDQTQLKLICDILQSLPELAPLLTLEIDERQLPPPEELQRLSHSLLKTGYRIGLQHFGGSFSQIGNLTQLGLAYLKIDAAYIRGIDEQSDKRLFIE AIFRATNSIDLPLIAEMVETQAELEVIRELGLFGVMGRLIGPPEPM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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