Strain | Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00058.58, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCTGGGCGTGCCCTACACCGATGAAGACATTGCCGGCGCTCGCGAGGCCGTCAAGGGCAAGACCGAGATGGATGCCCTGGTCGCCTACCTGCAGGGCCT CGGCACCGCAATCAAGAGCAAGAGATAACCGCGACCCGGCCCGACGGGCCGGGGACCCACAGGATTCGTGGAGCCTGATCAC
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DNA Sequence for Gene |
>H165_RS0117970
ATGACTTCATTCTGGAGCTGGTACGTTACGCTGCTGACCGTCGGCAGCCTGGTCGCCCTGCTGTGGCTGATATTCGCCACCCGGCGTGGCGAGACCCCGA ACGGCGGCAGCAAGACCATGGGCCATTCCTTCGATGGCATCGAGGAATACGACAACCCTCTGCCGAAGTGGTGGTTCCTGCTGTTCATCGGCACCATCGT CTTCGCCTTCGGCTACCTACTGCTTTACCCCGGCCTGGGCAACTGGAAGGGCGTCCTGCCCGGATACGACGGCTGGACCCAGGTCAAGCAGTGGGAGCGC GAAGTGGACGCCGCCGACAAGGCCTACGGCCCGCTGTTCGCCAGCCTCGGCGCCACCCCCATCGAGAAGCTGGCGCAGAACGAGCAGGCCCTGAAGATCG GCAACCGCCTGTTCGCCACCTACTGCGCCATCTGTCACGGCTCGGACGCCAAGGGTTCCCAGGGCTTTCCCAACCTGACCGACGACGTCTGGCGCTGGGG CGGCGATCCGGAAACCATCAAGACCACCATCCTGCACGGCCGCCAGGGCGCCATGCCGGCCTGGGGCGAGGTGATCGGCGAAGCAGGCGTGAAGAACGTG GCCGCCTATGTGCGCGCCAACCTGGCCGGCCTGCCGCTGCCGGAAGATCACGGTGCCGACCTGGCCGCCGGTCAGGAAGTGTTCCAGACCAACTGCGTCG CCTGTCACGGCCCGGACGGCAAGGGCATGGCCATGCTCGGCGCGCCTGACCTGACCCGTCCGGACGCCTTCATCTACGGCAGCAGCCTGAGCCAACTGCA GCAGACCGTGCGTAACGGCCGCAACGGCCAGATGCCAGCCCAGGAACAGTACCTCGGCAATGACAAGGTCCATGTTCTGGCTGCCTACGTGTACAGCCTG TCCAAGGGCAGCGCGCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGCAGCCCGGCGCAGGGGTCGCCCGACGGCTCCTGCGCCCCCCTTCCCCGCCTCGCCAGCTCGCCGCTCGCCCGAGTGCCGTTCCCGGCGCAAATTTA TGCGACCTAGTGTCGCACCTCACGTCCGTGCGTCTGCAGGGCTAACCTTTCCCCAGGCCTATCCCGACATCGGGCCCCGCCGGCAAGGGCGCTGCCCTTG CGCCATCCGGGCATTAAATAACCGCTGGAAAAATCCGCCTTATGGGTCTGAAATATCTTGTTGCAGATGCCCGGAGGCCTTGTAGTTACGGGTTCCGGCG TTGCAATGGATACCTGCTTTCTCCATACTTGCCGCCGCTTTTTTCCCTGCAAAACACCCCAAACCGTGGAACCTTAGAATGAGCACAGCAATCAGTCCGA CTGCTTATAACTATAAGGTGGTCCGCCAGTTCGCCATCATGACGGTGATCTGGGGGATCCTTGGCATGGGCATGGGCGTCTTCATTGCCTCGCAACTGGT
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Amino Acid Sequence |
>hypothetical protein
MTSFWSWYVTLLTVGSLVALLWLIFATRRGETPNGGSKTMGHSFDGIEEYDNPLPKWWFLLFIGTIVFAFGYLLLYPGLGNWKGVLPGYDGWTQVKQWER EVDAADKAYGPLFASLGATPIEKLAQNEQALKIGNRLFATYCAICHGSDAKGSQGFPNLTDDVWRWGGDPETIKTTILHGRQGAMPAWGEVIGEAGVKNV AAYVRANLAGLPLPEDHGADLAAGQEVFQTNCVACHGPDGKGMAMLGAPDLTRPDAFIYGSSLSQLQQTVRNGRNGQMPAQEQYLGNDKVHVLAAYVYSL SKGSAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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