Pseudomonas thermotolerans DSM 14292, H165_RS0112405
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00015.15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCTGCAGCCTGCAGATCGAGCTGCAGGACAGCCTGGTCCACACCCTGCAGGCCAGCATGGCCGGCCTGTGCGGGGCGCTGCTGTCGATCCTGCTCGGCTA CGGCCTGCAGAGCCCGGCGCAGATGGTCGCGACCCTGTTGCCGCTGATCTTCTTCTGCCGCACCTTCCAGGCCCATCGCTACGGCCTGTTCGTCCTGCAG TGCACGCTGTGCTTCGTGCTGCTCTCGGAAAGCCTCGCCGTGGACTGGGACCAACCGCAGGCCCGCCTGTTCAACAGCCTGCTAGGCGTCACCCTGGCGA TGCTGGTCGCCCTGCTGATGCACGGCCTGCGCCAGCACCTCGGCCGGGCGGGACTGCCCGTCTCGAAGTCCGAGCAGTCGTGAACTTGCGACGGGGCAAT GCCGGCGGGCTTGGGGCATAATGCGAACGAATTCACATCCTTGTAACCGCATCCTCATTCGTCACCTACTCGAACGCACGAGCGAAGGCTTACTACTTCC
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| DNA Sequence for Gene |
>H165_RS0112405
ATGATCCAGATGCTTCGACGCTTCGCCCTCGTGGGCCTGCTGCTGCCTCTTGCCCTGCCCGTTACCGCCAGTCCCGTGAACACCGCCCTGCCGGCCAGCA TCCAGAAGGCCCTGCAGAAGAGCAAGATCAACAGCCACTCGCTGGCGGTAGCGACCCTGCCGCTCACCGGCCCCGGCACCCCAACCCTGGTCAATGCCGA CGTGTCGATGAACCCGGCATCCACCATGAAGCTGGTCACCACCTACGCAGCCCTGGAGCTGCTCGGTCCCGCCTACCAGTGGAAGACCGAGTTCTATGCC GACGGCCCGCTGAAGGACGGCGTGCTGAATGGCAACCTCTACCTCAAGGGCGGCGGCGATCCCAAGCTGAACCTGGAGAAGCTCTGGCTGATGATGCGCG ACCTGCGCGCCAACGGCGTGCAGAGGATCACCGGCGACCTGGTGCTGGACCGCAGCCACTTCATCCAGCCGCAGCTGCCGATGTTCAACGACGACGGCGG CGACCCGCACCGCCCCTTCCTGGTCACCCCAGACTCCCTGCTCGTCAACCTCAAGGCCGTGCGCCTGGTCACCCGTACCGCGGACGGCAAGGTCAGCGTG TTCATGGATCCGCCGCTGACCAACGTGACCATCGACAACCAGATCAAGGCGCTGCCCGCCGCCAAGTGTCCGGGCTGGCCGGACGTGCGCTTCAACCCGG TGAACAACGCCGACGGCTCGGGCGCCACCCTGGTGGTCACCGGCAAGCTGCCGGAAGGCTGCAGCGCGCAGACCTATATCTCACTGCTCGACCACCCCGC CTACGCCGCCGGTGCCGTGCGGGCGATCTGGCAGGAGCTGGGCGGCAGCATCCAGGGCGGCGACAGGGTCGCCGAGGTGCCGAAGAACGCCCGCCTGCTG GCCCGCACCTTCTCGCCGGACCTGGCGGAGATCATCCGCGACATCAACAAGTACAGTAACAACACCATGTGCCGGCAGCTGTTCCTCAGCCTCGGCGCCC AGTTCCGCACCTCTGCCGATGCCGACGACGCCAAGGCCGCCCAGCGGGTGATCCGCCAGTGGCTGGCCCGCAAGGGCATCACCGCACCGCATCTGGTGAT GGAGAACGGCTCCGGGCTGTCCCGCGCCGAACGGATCAGCGCCCGGGAAATGCTCACCCTGCTGCAGAGCGCCTGGCACAGCCCCTATGCCGCGGAATTC ATCAGCTCCCTGCCGCTGGTGGCGACCGACGGCACCATGCGCAAGCGCCTGGCGCGCACCCCGCTGGCCGGTCAGGCCCATATCAAGACCGGCACGCTGA ATACCGTGCGCGCCATCGCCGGCTACAGCCGCGACGTCAACGGCCACACCTGGGCCGTGGTGGCCATCCTCAACGACCAGCGGCCCTGGGGCGCGACCTC CATCCTCGACCAGGTGCTGGTCGAGCTTTACCGCCAGCCGAAACTGGCCAGCACCACGGTCCAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGAAAAAGCCCCTCATCCATTCGGGTGAGGGGCTTGCTTGGTCCGCCTCTCGCGATCAGCCAAAAACCGTCGCCACCTGTCGACTGAGCGCCATCAGCTC GCCGTCCGGACTCCACAGCCGGGCAGCGATATGGCCGTAACCGTCGCGGGAGTGCTCAACCTCCGCCAGATACTGGAACCAGTCACGAGTGGTCGCGCGG GGAACCGGCTGGACGAACTCGATGGTCCAGGTCAGCGAACTGCCCGGCGCCGGCCGGCGCAGGTACGGCAGGGTCGCCGGCGGCCAAGCGTCGACCAGCG CCAGCAGGTCCGACTCGTCCACCGGCCGTTCCCCGGCTTCGGTACGGAAACCCACCCAGCCGCCCATCCGCCGCCGCGGCGTATTGGTGAAGGGCATGCC GCCGACAGCCCAGCGCATGGCCAGGTGCTGGGTGAAGTCCGGGGTCACTCCCTTCACATAGGGCAGCTCCATGGCCTCCGCGGCGGATTTCATCTCCGGC
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| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MIQMLRRFALVGLLLPLALPVTASPVNTALPASIQKALQKSKINSHSLAVATLPLTGPGTPTLVNADVSMNPASTMKLVTTYAALELLGPAYQWKTEFYA DGPLKDGVLNGNLYLKGGGDPKLNLEKLWLMMRDLRANGVQRITGDLVLDRSHFIQPQLPMFNDDGGDPHRPFLVTPDSLLVNLKAVRLVTRTADGKVSV FMDPPLTNVTIDNQIKALPAAKCPGWPDVRFNPVNNADGSGATLVVTGKLPEGCSAQTYISLLDHPAYAAGAVRAIWQELGGSIQGGDRVAEVPKNARLL ARTFSPDLAEIIRDINKYSNNTMCRQLFLSLGAQFRTSADADDAKAAQRVIRQWLARKGITAPHLVMENGSGLSRAERISAREMLTLLQSAWHSPYAAEF ISSLPLVATDGTMRKRLARTPLAGQAHIKTGTLNTVRAIAGYSRDVNGHTWAVVAILNDQRPWGATSILDQVLVELYRQPKLASTTVQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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