Pseudomonas thermotolerans DSM 14292, H165_RS0111755
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00014.14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCGACGCCCTGGCCGCCGAATCGGGCCCGCCGGCCCGCCAGCAGGCGCCGGCCGCGCCGGTGGTCAGGGCGCTGCATGGCCAGCAGGTCAGGCTGCCC GGCTACATAGTGCCGCTGGAGGTCAGCGAGGCGGGCCGGGTGACCGACTTCCTGCTGGTCCCCTACTACGGCGCCTGCATCCACGTGCCGCCCCCGCCGT CGAACCAGATCGTGCACGTCAGCAGCACGCAGGGCGTGCCGTTGGATGCCCTGTACCAGCCGTTCTGGGTGGAGGGGCAGCTGCGGGTCGAGCCGAGCAG TAGCGAGCTGGCGGAGGCCGGCTACCAGATGGCGGCGGACAGGATCTCCCCCTACCAATACGTCGAATGAGGCTCCGCGGGGCCGACAGGCTTAAGAAGG CCCCTTCTTATTAGCTAGCTATTGAGCTGGATCAATACTTGCCCGCCCCGCTTGCCACATAGTGCCCCCAGCCAACCGTATCAATGCTGAGGAGCATTAC
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| DNA Sequence for Gene |
>H165_RS0111755
ATGTACAAGTCTCTCGCAGCCGTGTCTCTGACTGCCCTGGCCCTGGCCGCCAGCCCGCTGGTTCAGGCCCACCAGGCCGGCGACATCATCGTCCGCGCCG GTGCCGTGACCGTGCAGACCGATGAAAACACTTCCGGCGTGAAGGTCGATCGTGGCAGCCTGGCCGGCACCGACCTGGGCGGCAAGGCCACCGTCAGCAA CGACACCCAGCTGGGCCTGAACTTCGCCTACATGCTCACCGACAACCTGGGCGTCGAGCTGCTGGCCGCCACTCCCTTCAAGCATGACGTGCATGTCAAG GGCGCAAGCCTGGGCACGGCCAACGGCAAGCTGGGTACCCTGGAGCACCTGCCGCCGACCCTGAGCCTGGTCTACTACCCCCTGGACTCCAAGTCGGCCT TCCAGCCCTATGTCGGTGCCGGCATCAACTACACCTGGTTCATGGACGGCGACACCAGCAGCGCTGCCGAAGCCAACGGTTTCCGCAACCTGCAGGCCAC CAACAGCTGGGGCTGGGCCGCACAGATCGGTGCCGACTACATGCTCACCGACAACATCATGATCAACGGCCAGATCCGCTACATCGACATCGACACCCAG GCCTACGTCGACAACGTCGACCTCGGCGTACGCGCCAAGGTGGACGTGGACGTCAAGCCCTGGGTCTACATGGTCGGCCTGGGCTACAAGTTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCCGCACGGCGCCCAAACACGACAAGACACCCCGACAGGTTCGGGGTGTCTTGTTTTGAGGGCCGGGAAAACTGCGGAAGGGATAGTGGCCGGGACCG CCCCGGCCACTCAGGCTCAACGGCCGAGCAGACGGGCCAGGCCGTCACGGATCGAGGTCGGTTCGGCGAACGCGAAGCGCTCCAGCAGACGGCGATTGTC GGCCCGCGAGTGCCGGATGTCGCCCGGCCGCGCCTCGGCATGGCGCACCTCGGGCAGGCCGCCGAGCACCTCGCGGATCGCTCCCAGCAGTTGGTTGAGG CTGGTGGCGCGGTTCAGACCGACGTTCACCGCCCCCGCCGCTACCTGCGGCAGCTCCACGGCCTGCACCAGCACCTTGACCAGATCGCCGACATACACGA AGTCGCGGGTCTGCTCGCCGTCGCCGAACACCGTGATCGGCGTGCCGGCCAGGGCCCGTTCGGTGAAGATGCTGATCACCCCCGAATAGGGCGAGGACGG
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| Amino Acid Sequence |
>outer membrane protein W
MYKSLAAVSLTALALAASPLVQAHQAGDIIVRAGAVTVQTDENTSGVKVDRGSLAGTDLGGKATVSNDTQLGLNFAYMLTDNLGVELLAATPFKHDVHVK GASLGTANGKLGTLEHLPPTLSLVYYPLDSKSAFQPYVGAGINYTWFMDGDTSSAAEANGFRNLQATNSWGWAAQIGADYMLTDNIMINGQIRYIDIDTQ AYVDNVDLGVRAKVDVDVKPWVYMVGLGYKF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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