Strain | Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00009.9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCTACGCCCAGCACATCGATGCCAGTTTCGAGGCCGCGCTGCCCCAGGCGGTCGGCCGGCACAGCCAGTGGCACGTCAATCTGGTGCGCCCGGGAGACC CGGTGCGCTGCGGCGAGGTAGTGGTGGTGCCCATTCAGCGCGAGCTGACGTTCGCCGCCGACGGCAGCATGCGCCTCGCCGAGCGCGGCTGGCCGGAGCC CTACAGCCCGTCCATCGACCAGATGATGCTCAACCTGGCCCAGCAGTTCGGCGCCCAGTGCGGGGTCATCGTGTTCAGTGGCATGGGCAGCGACGGCAGC GCGGCGGCGGCCTACGTGCGTCGCCAGGGCGCGCCGATCTGGACCCAGAGCGCCGACAGCTGCGCCTGCCCGAGCATGCCGGACAGCCTGCGCGAGGGCG GCTACAGCGCCTTCAGCGGTGACCCGCGGGCGCTCGCCGAGGCGCTGGTCCGCCAGCTGGCCGAGCAGTACACCTGAAGATCATCGCAAGCGGAGTTTCC
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DNA Sequence for Gene |
>H165_RS0108855
ATGAGCCAAGCCGTCGCCACCCCGAACAGCGTCACCAGCCTCACCGGGCTGCTTCTGCAACTGGCCGACCGCACCCTGCTGCTGCCCAACGTGGTGGTGG CCGAGATGATCGCCTACCGTGCGCCGCAGGTGACTCCGGGGATGCCGGCCTGGTTTCTCGGGCAGATCGCCTGGCGCGACCTGAGCCTGCCGCTGCTGTC CTTCGAGGCGGCCTCGGACGGCGCACCGCAGGTGTGCTCCGGCGCCCGGGTGGCGGTGCTCAACGCCCTGGGCGGCCGCCCGCAGGTGAAGTTCCTCGCC CTGCTGGTGCAGAGCATTCCGCGCTCGCTGAAGGTGGACGAGCAGTTGCCGCGCGCCGAGGCGCCGTTGGCGCCCCTGGAGCTGGCGGCGGTGCGCCTCG GCGACACTCTGGCGAAGATCCCCGACCTGGTCGGTCTGGAACAGAAGCTCGCCGACGCCGGGCTGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCCGGGCGGTGCGCACCGCTCAGAAATCGCCCCAGAGCTGCTGCGCCACGCTGAGCGCCACCACCGGCGCGGTCTCGGTACGCAGCACTCGCGGGCCG AGGCGCGCAGCCTGGAAGCCTCGGCCTTTGGCCTGTTCTACCTCGGCGTCGGCAAGGCCGCCCTCGGGGCCGATCAGGAAGGCCAGGCTCGCCGGCCGGG CATGGCGTTCCAGTGGTTCGGCCACCGGGTGCAGGACCAGCTTCAGCTCGGCCTCGACCCTCTCCAGCCAGTCCTCGAGCAGCAGTGGTGGGTGGATCAG CGGCAGCACCGAGCGGCCGCACTGCTCGCAGGCGCTGACTGCCACCTGGCGCCAGTGGGCCAGGCGCTTGTCGGCGCGCTCGTCCTTCAGGCGGACCTCG CAGCGCTCGCTGACGATCGGGGTGATCTCGGCCACGCCCAGTTCGGTGGCCTTCTGGATCGCCCAGTCCATGCGCTCGCCGCGCGACAGGCCCTGGCCGA
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Amino Acid Sequence |
>chemotaxis protein
MSQAVATPNSVTSLTGLLLQLADRTLLLPNVVVAEMIAYRAPQVTPGMPAWFLGQIAWRDLSLPLLSFEAASDGAPQVCSGARVAVLNALGGRPQVKFLA LLVQSIPRSLKVDEQLPRAEAPLAPLELAAVRLGDTLAKIPDLVGLEQKLADAGLI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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