Pseudomonas thermotolerans DSM 14292, H165_RS0108380
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00009.9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTAGCGCATGGTCTTGCGGCAGGCCAGGGTGAATTCCACCGGCCAGGTGCGGTCGCCGAGGGTCAGCAGGGTGCGGATCACGTAGCGGCTCTGCGCCTGG CCGTTGGAGCTGCGGATGGTCTTCACCGTGACCAGCGGGGCTTCGCAGCGGTGGCGACGCTGCACCAGGGTGCCGAGATGGGCGGTGAAGCGCACCCAGT CCTCGCCGTCGCGGGTGAACGGCTGGATGTCGGTGGCGTGCAGGGCCGAGGTGCTGGCGCCGGTGTCGATCTTGGCGCGCAGGCCGACCATCCCCAGCTC GGGCAGGTTGATCCATTCGCGCAGGCCGATCACCGTGAGCTGGTCGAAGGTCTTCAAGGTCGGGCTTTACCAGGCGCACAGGGCAGGAACGATGACGGCA TTCTAGACGTGCCCGGGCAGACCTGCACCTGCCCCGCGGGGAGGTTTACCGCGACGCGGAATCGTGCTGCCATGGAGGGCGATGCATTGCGGAGCCCTGC
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| DNA Sequence for Gene |
>H165_RS0108380
ATGAGCGACAGAGACCAAGACGACAAGGTGCGCCTCGACAAGTGGCTGTGGGCGGCGCGCTTCTTCAAGACCCGCGCCCTGGCCAAGGCGGCCATCGAGG GTGGCAAGGTGCACTGCCGCGGCGAGCGCTGCAAGCCGAGCAAGGAGCCGAAGATCGGCGACGAGCTGACCATCCGCACCGGCTTCGACGAACGTACCGT GGTGATCCAGGCGCTGTCCGCGGTACGCCGCGGCGCTCCCGAGGCTCAGACCCTGTACCGCGAGACCGAGGAGAGCATCACCCGCCGCGAACGCGCTGCG GCCCTGCGCAAGGCCGGCGCCCTAGGCGTACAGACCGAGGGCCGGCCAACCAAGAAGCAGCGCCGACAGATCCGCCAGTTCGCCGACCAGCATCAGGGCG GCCTCCGGCACCCCTGGCAGGAGCAGGACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCTTGAGGGACTCCCTGGCACTCCGCGGCGCGTTGCCCAGCTTGGCGTAGGAGACCCGTGGCACCCCGGCCAGGCGCCTGGTGAGCAGCGCGTCCAGG GACTCGCCTGGGGCCAGGTAGGCGTCGCCGAAGCCGGCGTCGAGCCGACTGGGATGGGCGATCACCTCCAGGCAGCCCCGGGCCGGCGGCGGCTGGTCGC GCAGATCCGCCGGGGTGCACACCCAGTCCGCGCTGGCGCCGGCCAGCTGGCGCAGGCGGCGGTTGAGCAGCCACTTGAACAACCGCTTGCCCGGGCCGAT GTTGCCGCCCAGGTTGCGCGCCAGGCGGATCGGCACCCCCTGGCGGGCGGCGAAGCGCGCCAGCTCCTCGCCGATCGGCCAGATGTTGTGCATGTGCTGG TGGGAATCCAGGTGGCTGGGCCGCACCCCGTGGTTCAGGCAGCGCTGCCACTGGGCCTGTAGCTCCTCGGCCACGGCGGCGCGCACCCGGCGGGGTAGCC
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| Amino Acid Sequence |
>RNA-binding protein S4
MSDRDQDDKVRLDKWLWAARFFKTRALAKAAIEGGKVHCRGERCKPSKEPKIGDELTIRTGFDERTVVIQALSAVRRGAPEAQTLYRETEESITRRERAA ALRKAGALGVQTEGRPTKKQRRQIRQFADQHQGGLRHPWQEQD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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